Hb_000329_100

Information

Type -
Description -
Location Contig329: 48769-52016
Sequence    

Annotation

kegg
ID rcu:RCOM_1611210
description oxidoreductase, putative
nr
ID XP_012083603.1
description PREDICTED: uncharacterized protein LOC105643144 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAE5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14545 PE=4 SV=1
Gene Ontology
ID GO:0009507
description nitroreductase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34490: 49371-51968
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000329_100 0.0 - - PREDICTED: uncharacterized protein LOC105643144 [Jatropha curcas]
2 Hb_010180_060 0.1069155371 - - PREDICTED: uncharacterized protein LOC105648049 [Jatropha curcas]
3 Hb_024185_010 0.1176966492 transcription factor TF Family: PHD PREDICTED: histone acetyltransferase HAC1 isoform X1 [Jatropha curcas]
4 Hb_007575_080 0.1194796634 - - PREDICTED: lysine-specific histone demethylase 1 homolog 3 [Jatropha curcas]
5 Hb_000005_070 0.1203435638 transcription factor TF Family: PHD protein binding protein, putative [Ricinus communis]
6 Hb_005488_170 0.1219659111 - - PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Jatropha curcas]
7 Hb_003805_050 0.1224835727 - - -
8 Hb_002909_120 0.1231413386 - - PREDICTED: transcription elongation factor SPT6 [Jatropha curcas]
9 Hb_000928_090 0.1236786349 - - PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Jatropha curcas]
10 Hb_013405_160 0.1241551914 - - PREDICTED: methyltransferase-like protein 1 isoform X2 [Jatropha curcas]
11 Hb_008053_040 0.1259061215 - - PREDICTED: mediator of RNA polymerase II transcription subunit 12-like [Pyrus x bretschneideri]
12 Hb_002636_110 0.1292246245 - - PREDICTED: heat shock protein 83-like isoform X2 [Gossypium raimondii]
13 Hb_001232_100 0.1292845389 - - Heat shock 70 kDa protein, putative [Ricinus communis]
14 Hb_002687_090 0.1296839659 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
15 Hb_000720_150 0.129982752 - - PREDICTED: uncharacterized protein LOC105645849 isoform X3 [Jatropha curcas]
16 Hb_000573_060 0.1312440359 - - PREDICTED: eukaryotic translation initiation factor 2D isoform X1 [Jatropha curcas]
17 Hb_000046_580 0.1317048808 - - PREDICTED: uncharacterized protein LOC105631800 [Jatropha curcas]
18 Hb_001563_010 0.1325515694 transcription factor TF Family: SET PREDICTED: probable histone-lysine N-methyltransferase ATXR3 [Jatropha curcas]
19 Hb_002521_020 0.1329863966 - - PREDICTED: pentatricopeptide repeat-containing protein At1g03100, mitochondrial-like isoform X2 [Jatropha curcas]
20 Hb_002600_060 0.1338234666 - - PREDICTED: putative nuclear matrix constituent protein 1-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_000329_100 Hb_000329_100 Hb_010180_060 Hb_010180_060 Hb_000329_100--Hb_010180_060 Hb_024185_010 Hb_024185_010 Hb_000329_100--Hb_024185_010 Hb_007575_080 Hb_007575_080 Hb_000329_100--Hb_007575_080 Hb_000005_070 Hb_000005_070 Hb_000329_100--Hb_000005_070 Hb_005488_170 Hb_005488_170 Hb_000329_100--Hb_005488_170 Hb_003805_050 Hb_003805_050 Hb_000329_100--Hb_003805_050 Hb_002521_020 Hb_002521_020 Hb_010180_060--Hb_002521_020 Hb_008053_040 Hb_008053_040 Hb_010180_060--Hb_008053_040 Hb_006839_010 Hb_006839_010 Hb_010180_060--Hb_006839_010 Hb_010180_060--Hb_005488_170 Hb_000059_230 Hb_000059_230 Hb_010180_060--Hb_000059_230 Hb_003805_040 Hb_003805_040 Hb_010180_060--Hb_003805_040 Hb_024185_010--Hb_007575_080 Hb_000720_150 Hb_000720_150 Hb_024185_010--Hb_000720_150 Hb_006117_080 Hb_006117_080 Hb_024185_010--Hb_006117_080 Hb_024185_010--Hb_008053_040 Hb_000661_130 Hb_000661_130 Hb_024185_010--Hb_000661_130 Hb_000703_130 Hb_000703_130 Hb_024185_010--Hb_000703_130 Hb_007575_080--Hb_008053_040 Hb_007575_080--Hb_006117_080 Hb_000321_150 Hb_000321_150 Hb_007575_080--Hb_000321_150 Hb_007575_080--Hb_000661_130 Hb_002780_010 Hb_002780_010 Hb_007575_080--Hb_002780_010 Hb_128743_010 Hb_128743_010 Hb_000005_070--Hb_128743_010 Hb_000174_290 Hb_000174_290 Hb_000005_070--Hb_000174_290 Hb_004079_060 Hb_004079_060 Hb_000005_070--Hb_004079_060 Hb_004108_100 Hb_004108_100 Hb_000005_070--Hb_004108_100 Hb_000005_070--Hb_006117_080 Hb_002233_100 Hb_002233_100 Hb_000005_070--Hb_002233_100 Hb_002600_060 Hb_002600_060 Hb_005488_170--Hb_002600_060 Hb_005701_130 Hb_005701_130 Hb_005488_170--Hb_005701_130 Hb_002909_120 Hb_002909_120 Hb_005488_170--Hb_002909_120 Hb_010998_020 Hb_010998_020 Hb_005488_170--Hb_010998_020 Hb_012053_090 Hb_012053_090 Hb_005488_170--Hb_012053_090 Hb_005348_010 Hb_005348_010 Hb_005488_170--Hb_005348_010 Hb_000083_070 Hb_000083_070 Hb_003805_050--Hb_000083_070 Hb_003805_050--Hb_005348_010 Hb_000329_750 Hb_000329_750 Hb_003805_050--Hb_000329_750 Hb_002095_070 Hb_002095_070 Hb_003805_050--Hb_002095_070 Hb_003805_050--Hb_024185_010 Hb_006295_020 Hb_006295_020 Hb_003805_050--Hb_006295_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.25251 39.2988 11.1157 13.8251 31.0307 11.108
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.66516 8.96685 13.8121 13.6839 37.0803

CAGE analysis