Hb_001232_100

Information

Type -
Description -
Location Contig1232: 82277-87796
Sequence    

Annotation

kegg
ID rcu:RCOM_0980870
description Heat shock 70 kDa protein, putative (EC:1.3.1.74)
nr
ID XP_002528199.1
description Heat shock 70 kDa protein, putative [Ricinus communis]
swissprot
ID Q9S7C0
description Heat shock 70 kDa protein 14 OS=Arabidopsis thaliana GN=HSP70-14 PE=2 SV=1
trembl
ID B9SQC9
description Heat shock 70 kDa protein, putative OS=Ricinus communis GN=RCOM_0980870 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock 70 kda protein 15-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07057: 82199-87856 , PASA_asmbl_07058: 82324-87860 , PASA_asmbl_07059: 86654-86784
cDNA
(Sanger)
(ID:Location)		 031_L23.ab1: 82199-84213

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001232_100 0.0 - - Heat shock 70 kDa protein, putative [Ricinus communis]
2 Hb_000260_560 0.1068299755 - - PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Jatropha curcas]
3 Hb_000334_170 0.1069347207 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 isoform X1 [Jatropha curcas]
4 Hb_006618_040 0.1166931467 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
5 Hb_000573_060 0.1197039967 - - PREDICTED: eukaryotic translation initiation factor 2D isoform X1 [Jatropha curcas]
6 Hb_006052_030 0.1242236204 - - PREDICTED: dnaJ protein ERDJ3A [Jatropha curcas]
7 Hb_000329_100 0.1292845389 - - PREDICTED: uncharacterized protein LOC105643144 [Jatropha curcas]
8 Hb_000958_070 0.132381491 - - hypothetical protein PRUPE_ppa007681mg [Prunus persica]
9 Hb_002641_130 0.1330620192 - - PREDICTED: uncharacterized protein LOC105643556 [Jatropha curcas]
10 Hb_001244_150 0.1394653173 - - transformer serine/arginine-rich ribonucleoprotein [Populus trichocarpa]
11 Hb_009486_080 0.1399011458 - - PREDICTED: uncharacterized protein LOC105643242 [Jatropha curcas]
12 Hb_001454_170 0.1415597528 - - PREDICTED: uncharacterized protein LOC105643431 [Jatropha curcas]
13 Hb_000343_110 0.1423623337 - - Heat shock 70 kDa protein, putative [Ricinus communis]
14 Hb_002636_110 0.1431057782 - - PREDICTED: heat shock protein 83-like isoform X2 [Gossypium raimondii]
15 Hb_000086_150 0.1453652005 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 isoform X1 [Jatropha curcas]
16 Hb_002400_230 0.1511118227 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
17 Hb_000243_130 0.1528411178 - - hypothetical protein M569_10795, partial [Genlisea aurea]
18 Hb_000041_300 0.1538666253 transcription factor TF Family: SNF2 PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X2 [Jatropha curcas]
19 Hb_000608_300 0.1542612208 - - PREDICTED: protein KRI1 homolog [Jatropha curcas]
20 Hb_005181_040 0.1544654331 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]

Gene co-expression network

sample Hb_001232_100 Hb_001232_100 Hb_000260_560 Hb_000260_560 Hb_001232_100--Hb_000260_560 Hb_000334_170 Hb_000334_170 Hb_001232_100--Hb_000334_170 Hb_006618_040 Hb_006618_040 Hb_001232_100--Hb_006618_040 Hb_000573_060 Hb_000573_060 Hb_001232_100--Hb_000573_060 Hb_006052_030 Hb_006052_030 Hb_001232_100--Hb_006052_030 Hb_000329_100 Hb_000329_100 Hb_001232_100--Hb_000329_100 Hb_000958_070 Hb_000958_070 Hb_000260_560--Hb_000958_070 Hb_002233_130 Hb_002233_130 Hb_000260_560--Hb_002233_130 Hb_000260_560--Hb_000573_060 Hb_000086_150 Hb_000086_150 Hb_000260_560--Hb_000086_150 Hb_001244_150 Hb_001244_150 Hb_000260_560--Hb_001244_150 Hb_009486_080 Hb_009486_080 Hb_000260_560--Hb_009486_080 Hb_000334_170--Hb_000260_560 Hb_001040_070 Hb_001040_070 Hb_000334_170--Hb_001040_070 Hb_000175_630 Hb_000175_630 Hb_000334_170--Hb_000175_630 Hb_000264_230 Hb_000264_230 Hb_000334_170--Hb_000264_230 Hb_000041_300 Hb_000041_300 Hb_000334_170--Hb_000041_300 Hb_006618_040--Hb_000334_170 Hb_000343_110 Hb_000343_110 Hb_006618_040--Hb_000343_110 Hb_000941_140 Hb_000941_140 Hb_006618_040--Hb_000941_140 Hb_002400_230 Hb_002400_230 Hb_006618_040--Hb_002400_230 Hb_004296_010 Hb_004296_010 Hb_006618_040--Hb_004296_010 Hb_002641_130 Hb_002641_130 Hb_000573_060--Hb_002641_130 Hb_000573_060--Hb_001244_150 Hb_000573_060--Hb_000086_150 Hb_000573_060--Hb_009486_080 Hb_001001_150 Hb_001001_150 Hb_000573_060--Hb_001001_150 Hb_006052_030--Hb_000958_070 Hb_006052_030--Hb_000334_170 Hb_006052_030--Hb_000260_560 Hb_022250_100 Hb_022250_100 Hb_006052_030--Hb_022250_100 Hb_006052_030--Hb_000041_300 Hb_010180_060 Hb_010180_060 Hb_000329_100--Hb_010180_060 Hb_024185_010 Hb_024185_010 Hb_000329_100--Hb_024185_010 Hb_007575_080 Hb_007575_080 Hb_000329_100--Hb_007575_080 Hb_000005_070 Hb_000005_070 Hb_000329_100--Hb_000005_070 Hb_005488_170 Hb_005488_170 Hb_000329_100--Hb_005488_170 Hb_003805_050 Hb_003805_050 Hb_000329_100--Hb_003805_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.0178 102.048 67.73 68.5149 172.964 50.2174
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.5747 26.1605 42.6866 66.9877 139.231

CAGE analysis