Hb_165026_010

Information

Type transcription factor
Description TF Family: NAC
Location Contig165026: 3403-5838
Sequence    

Annotation

kegg
ID pop:POPTR_0014s10320g
description POPTRDRAFT_572482; hypothetical protein
nr
ID KDP28395.1
description hypothetical protein JCGZ_14166 [Jatropha curcas]
swissprot
ID A4VCM0
description NAC domain-containing protein 45 OS=Arabidopsis thaliana GN=NAC045 PE=2 SV=1
trembl
ID A0A067K7Z3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14166 PE=4 SV=1
Gene Ontology
ID GO:0003677
description nam protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_165026_010 0.0 transcription factor TF Family: NAC hypothetical protein JCGZ_14166 [Jatropha curcas]
2 Hb_001105_110 0.1287733064 - - conserved hypothetical protein [Ricinus communis]
3 Hb_010872_070 0.1365745623 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000197_250 0.1487729766 - - Chaperone protein dnaJ, putative [Ricinus communis]
5 Hb_000656_390 0.1494833746 - - PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Jatropha curcas]
6 Hb_007810_010 0.1537488965 - - PREDICTED: uncharacterized protein LOC105647655 isoform X1 [Jatropha curcas]
7 Hb_002042_170 0.1542486111 - - RING/U-box superfamily protein [Theobroma cacao]
8 Hb_000152_330 0.1577736968 - - PREDICTED: AT-hook motif nuclear-localized protein 6-like [Jatropha curcas]
9 Hb_003657_010 0.1587782177 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000417_300 0.1643546008 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [Jatropha curcas]
11 Hb_000432_090 0.1644854934 - - calcium-dependent protein kinase [Hevea brasiliensis]
12 Hb_001404_110 0.1654059253 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
13 Hb_012573_040 0.1660693283 - - PREDICTED: F-box/kelch-repeat protein At1g55270-like [Jatropha curcas]
14 Hb_000270_120 0.1671730184 - - PREDICTED: pentatricopeptide repeat-containing protein At1g18900 [Jatropha curcas]
15 Hb_024404_020 0.1680719653 - - PREDICTED: putative F-box protein At1g65770 [Jatropha curcas]
16 Hb_025708_020 0.1685421446 - - receptor protein kinase, putative [Ricinus communis]
17 Hb_000226_080 0.1698626386 - - prephenate dehydrogenase, putative [Ricinus communis]
18 Hb_004429_020 0.1721802249 - - PREDICTED: magnesium transporter MRS2-5 [Jatropha curcas]
19 Hb_000398_100 0.1765974712 - - Uncharacterized protein isoform 2 [Theobroma cacao]
20 Hb_001541_070 0.1766608593 - - PREDICTED: protein-tyrosine-phosphatase MKP1-like [Jatropha curcas]

Gene co-expression network

sample Hb_165026_010 Hb_165026_010 Hb_001105_110 Hb_001105_110 Hb_165026_010--Hb_001105_110 Hb_010872_070 Hb_010872_070 Hb_165026_010--Hb_010872_070 Hb_000197_250 Hb_000197_250 Hb_165026_010--Hb_000197_250 Hb_000656_390 Hb_000656_390 Hb_165026_010--Hb_000656_390 Hb_007810_010 Hb_007810_010 Hb_165026_010--Hb_007810_010 Hb_002042_170 Hb_002042_170 Hb_165026_010--Hb_002042_170 Hb_000086_630 Hb_000086_630 Hb_001105_110--Hb_000086_630 Hb_004429_020 Hb_004429_020 Hb_001105_110--Hb_004429_020 Hb_001635_190 Hb_001635_190 Hb_001105_110--Hb_001635_190 Hb_000270_120 Hb_000270_120 Hb_001105_110--Hb_000270_120 Hb_002471_090 Hb_002471_090 Hb_001105_110--Hb_002471_090 Hb_000243_260 Hb_000243_260 Hb_001105_110--Hb_000243_260 Hb_026048_110 Hb_026048_110 Hb_010872_070--Hb_026048_110 Hb_010872_070--Hb_002042_170 Hb_002333_070 Hb_002333_070 Hb_010872_070--Hb_002333_070 Hb_010872_070--Hb_000656_390 Hb_013241_010 Hb_013241_010 Hb_010872_070--Hb_013241_010 Hb_010872_070--Hb_007810_010 Hb_003657_010 Hb_003657_010 Hb_000197_250--Hb_003657_010 Hb_000256_040 Hb_000256_040 Hb_000197_250--Hb_000256_040 Hb_005245_100 Hb_005245_100 Hb_000197_250--Hb_005245_100 Hb_004117_260 Hb_004117_260 Hb_000197_250--Hb_004117_260 Hb_000393_020 Hb_000393_020 Hb_000197_250--Hb_000393_020 Hb_006162_030 Hb_006162_030 Hb_000197_250--Hb_006162_030 Hb_000951_130 Hb_000951_130 Hb_000656_390--Hb_000951_130 Hb_006970_050 Hb_006970_050 Hb_000656_390--Hb_006970_050 Hb_009288_010 Hb_009288_010 Hb_000656_390--Hb_009288_010 Hb_001723_100 Hb_001723_100 Hb_000656_390--Hb_001723_100 Hb_000152_330 Hb_000152_330 Hb_000656_390--Hb_000152_330 Hb_002272_030 Hb_002272_030 Hb_000656_390--Hb_002272_030 Hb_002043_030 Hb_002043_030 Hb_007810_010--Hb_002043_030 Hb_004218_020 Hb_004218_020 Hb_007810_010--Hb_004218_020 Hb_000008_440 Hb_000008_440 Hb_007810_010--Hb_000008_440 Hb_007810_010--Hb_003657_010 Hb_000120_640 Hb_000120_640 Hb_007810_010--Hb_000120_640 Hb_001541_070 Hb_001541_070 Hb_007810_010--Hb_001541_070 Hb_004774_020 Hb_004774_020 Hb_002042_170--Hb_004774_020 Hb_000156_090 Hb_000156_090 Hb_002042_170--Hb_000156_090 Hb_003925_040 Hb_003925_040 Hb_002042_170--Hb_003925_040 Hb_002042_170--Hb_000656_390 Hb_171900_020 Hb_171900_020 Hb_002042_170--Hb_171900_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.312632 4.56445 3.66201 2.38523 0.91071 1.00092
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.62198 1.65096 4.91881 1.71821 1.92552

CAGE analysis