Hb_158832_010

Information

Type -
Description -
Location Contig158832: 2670-3127
Sequence    

Annotation

kegg
ID rcu:RCOM_1278040
description hypothetical protein
nr
ID XP_002527640.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SNS1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1278040 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_158832_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_012002_010 0.2493554311 - - hypothetical protein VITISV_016116 [Vitis vinifera]
3 Hb_000664_100 0.2520243338 - - PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
4 Hb_000200_080 0.2620808858 - - PREDICTED: uncharacterized protein LOC104877459 [Vitis vinifera]
5 Hb_000905_050 0.2740717546 - - Zeamatin precursor, putative [Ricinus communis]
6 Hb_002836_040 0.2956925558 - - Auxin-induced protein 5NG4 [Glycine soja]
7 Hb_025213_020 0.3027176067 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
8 Hb_002965_110 0.3044864835 - - hypothetical protein POPTR_0010s15040g [Populus trichocarpa]
9 Hb_000815_220 0.313119965 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000920_090 0.3162924311 - - PREDICTED: LOW QUALITY PROTEIN: vinorine synthase-like [Jatropha curcas]
11 Hb_003913_010 0.3208313084 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000248_110 0.3462134763 - - hypothetical protein VITISV_037580 [Vitis vinifera]
13 Hb_004064_030 0.3512307747 - - aldose-1-epimerase, putative [Ricinus communis]
14 Hb_001520_030 0.3525075866 transcription factor TF Family: MYB PREDICTED: trichome differentiation protein GL1-like isoform X2 [Populus euphratica]
15 Hb_053422_010 0.3670028012 - - PREDICTED: uncharacterized protein LOC105641005 [Jatropha curcas]
16 Hb_004954_020 0.368528886 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
17 Hb_031527_010 0.3722094295 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000061_290 0.3783553283 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004713_020 0.378595523 - - -
20 Hb_010098_030 0.3785962457 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_158832_010 Hb_158832_010 Hb_012002_010 Hb_012002_010 Hb_158832_010--Hb_012002_010 Hb_000664_100 Hb_000664_100 Hb_158832_010--Hb_000664_100 Hb_000200_080 Hb_000200_080 Hb_158832_010--Hb_000200_080 Hb_000905_050 Hb_000905_050 Hb_158832_010--Hb_000905_050 Hb_002836_040 Hb_002836_040 Hb_158832_010--Hb_002836_040 Hb_025213_020 Hb_025213_020 Hb_158832_010--Hb_025213_020 Hb_003913_010 Hb_003913_010 Hb_012002_010--Hb_003913_010 Hb_012002_010--Hb_000664_100 Hb_000563_520 Hb_000563_520 Hb_012002_010--Hb_000563_520 Hb_003906_080 Hb_003906_080 Hb_012002_010--Hb_003906_080 Hb_004393_040 Hb_004393_040 Hb_012002_010--Hb_004393_040 Hb_005991_030 Hb_005991_030 Hb_012002_010--Hb_005991_030 Hb_002965_110 Hb_002965_110 Hb_000664_100--Hb_002965_110 Hb_031527_010 Hb_031527_010 Hb_000664_100--Hb_031527_010 Hb_001520_030 Hb_001520_030 Hb_000664_100--Hb_001520_030 Hb_010488_050 Hb_010488_050 Hb_000664_100--Hb_010488_050 Hb_002739_140 Hb_002739_140 Hb_000664_100--Hb_002739_140 Hb_004713_020 Hb_004713_020 Hb_000200_080--Hb_004713_020 Hb_005379_010 Hb_005379_010 Hb_000200_080--Hb_005379_010 Hb_074822_010 Hb_074822_010 Hb_000200_080--Hb_074822_010 Hb_121954_010 Hb_121954_010 Hb_000200_080--Hb_121954_010 Hb_003279_010 Hb_003279_010 Hb_000200_080--Hb_003279_010 Hb_000646_030 Hb_000646_030 Hb_000200_080--Hb_000646_030 Hb_001102_120 Hb_001102_120 Hb_000905_050--Hb_001102_120 Hb_116701_030 Hb_116701_030 Hb_000905_050--Hb_116701_030 Hb_028872_020 Hb_028872_020 Hb_000905_050--Hb_028872_020 Hb_129420_010 Hb_129420_010 Hb_000905_050--Hb_129420_010 Hb_003183_010 Hb_003183_010 Hb_000905_050--Hb_003183_010 Hb_000914_010 Hb_000914_010 Hb_000905_050--Hb_000914_010 Hb_004954_020 Hb_004954_020 Hb_002836_040--Hb_004954_020 Hb_000116_140 Hb_000116_140 Hb_002836_040--Hb_000116_140 Hb_000516_050 Hb_000516_050 Hb_002836_040--Hb_000516_050 Hb_053422_010 Hb_053422_010 Hb_002836_040--Hb_053422_010 Hb_000122_120 Hb_000122_120 Hb_002836_040--Hb_000122_120 Hb_025213_020--Hb_002965_110 Hb_025213_020--Hb_000664_100 Hb_025213_020--Hb_001520_030 Hb_004586_410 Hb_004586_410 Hb_025213_020--Hb_004586_410 Hb_000805_050 Hb_000805_050 Hb_025213_020--Hb_000805_050 Hb_036790_050 Hb_036790_050 Hb_025213_020--Hb_036790_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.230501 0 0 0.30305 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.357048

CAGE analysis