Hb_036790_050

Information

Type -
Description -
Location Contig36790: 41772-66901
Sequence    

Annotation

kegg
ID rcu:RCOM_0296590
description Peroxidase 12 precursor, putative (EC:1.11.1.7)
nr
ID XP_012073950.1
description PREDICTED: peroxidase 12-like [Jatropha curcas]
swissprot
ID Q96520
description Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1
trembl
ID A0A0E0CDA7
description Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1
Gene Ontology
ID GO:0005618
description peroxidase 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036790_050 0.0 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
2 Hb_060783_010 0.0271482356 - - Chloride channel protein CLC-c [Populus trichocarpa]
3 Hb_002559_020 0.0600722494 transcription factor TF Family: TUB -
4 Hb_001144_030 0.1060878932 - - hypothetical protein CICLE_v10023280mg, partial [Citrus clementina]
5 Hb_005207_040 0.1071678782 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Cicer arietinum]
6 Hb_188281_020 0.1464410293 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
7 Hb_105885_010 0.1520431259 - - PREDICTED: uncharacterized protein LOC103441690 [Malus domestica]
8 Hb_005056_040 0.1531603315 - - hypothetical protein POPTR_0007s14730g [Populus trichocarpa]
9 Hb_184074_010 0.1563011549 - - PREDICTED: uncharacterized protein LOC105639054 [Jatropha curcas]
10 Hb_004713_040 0.1607881528 - - hypothetical protein JCGZ_22567 [Jatropha curcas]
11 Hb_003688_120 0.1633058217 - - PREDICTED: uncharacterized protein LOC105350793 [Fragaria vesca subsp. vesca]
12 Hb_000959_110 0.1649890003 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
13 Hb_001019_030 0.1666590125 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
14 Hb_002276_120 0.1696136329 - - hypothetical protein POPTR_0010s14710g [Populus trichocarpa]
15 Hb_014102_010 0.1697564626 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
16 Hb_151052_010 0.1710767856 - - -
17 Hb_005653_010 0.1710817935 - - CEN-like protein 2 [Jatropha curcas]
18 Hb_031579_010 0.1729574151 - - JHL22C18.10 [Jatropha curcas]
19 Hb_001477_050 0.1746063064 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
20 Hb_000917_030 0.1747989561 - - PREDICTED: uncharacterized protein LOC102629571 [Citrus sinensis]

Gene co-expression network

sample Hb_036790_050 Hb_036790_050 Hb_060783_010 Hb_060783_010 Hb_036790_050--Hb_060783_010 Hb_002559_020 Hb_002559_020 Hb_036790_050--Hb_002559_020 Hb_001144_030 Hb_001144_030 Hb_036790_050--Hb_001144_030 Hb_005207_040 Hb_005207_040 Hb_036790_050--Hb_005207_040 Hb_188281_020 Hb_188281_020 Hb_036790_050--Hb_188281_020 Hb_105885_010 Hb_105885_010 Hb_036790_050--Hb_105885_010 Hb_060783_010--Hb_002559_020 Hb_060783_010--Hb_005207_040 Hb_060783_010--Hb_001144_030 Hb_003688_120 Hb_003688_120 Hb_060783_010--Hb_003688_120 Hb_014102_010 Hb_014102_010 Hb_060783_010--Hb_014102_010 Hb_002559_020--Hb_005207_040 Hb_002559_020--Hb_001144_030 Hb_002559_020--Hb_003688_120 Hb_002559_020--Hb_014102_010 Hb_000014_200 Hb_000014_200 Hb_001144_030--Hb_000014_200 Hb_001144_030--Hb_005207_040 Hb_169960_010 Hb_169960_010 Hb_001144_030--Hb_169960_010 Hb_005207_040--Hb_003688_120 Hb_005207_040--Hb_014102_010 Hb_005207_040--Hb_169960_010 Hb_002031_020 Hb_002031_020 Hb_188281_020--Hb_002031_020 Hb_003788_030 Hb_003788_030 Hb_188281_020--Hb_003788_030 Hb_000581_010 Hb_000581_010 Hb_188281_020--Hb_000581_010 Hb_025557_080 Hb_025557_080 Hb_188281_020--Hb_025557_080 Hb_025557_070 Hb_025557_070 Hb_188281_020--Hb_025557_070 Hb_000487_350 Hb_000487_350 Hb_188281_020--Hb_000487_350 Hb_002073_160 Hb_002073_160 Hb_105885_010--Hb_002073_160 Hb_001174_040 Hb_001174_040 Hb_105885_010--Hb_001174_040 Hb_105885_010--Hb_188281_020 Hb_001210_120 Hb_001210_120 Hb_105885_010--Hb_001210_120 Hb_105885_010--Hb_002031_020 Hb_105885_010--Hb_025557_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0372135 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00335519 0.0181551

CAGE analysis