Hb_001210_120

Information

Type -
Description -
Location Contig1210: 141801-143664
Sequence    

Annotation

kegg
ID cit:102628765
description neurogenic locus protein delta-like
nr
ID KDP37170.1
description hypothetical protein JCGZ_06226 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KY33
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06226 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001210_120 0.0 - - hypothetical protein JCGZ_06226 [Jatropha curcas]
2 Hb_002073_160 0.1054950139 - - hypothetical protein JCGZ_21740 [Jatropha curcas]
3 Hb_105885_010 0.1143454343 - - PREDICTED: uncharacterized protein LOC103441690 [Malus domestica]
4 Hb_007237_060 0.12884636 - - -
5 Hb_000237_060 0.1493484179 - - hypothetical protein PRUPE_ppa022052mg, partial [Prunus persica]
6 Hb_000959_200 0.1573634902 - - PREDICTED: uncharacterized protein LOC105636578 [Jatropha curcas]
7 Hb_000685_100 0.1604012772 - - hypothetical protein POPTR_0001s10630g [Populus trichocarpa]
8 Hb_025557_080 0.1634906773 transcription factor TF Family: zf-HD -
9 Hb_025557_070 0.1668547746 transcription factor TF Family: zf-HD hypothetical protein JCGZ_11626 [Jatropha curcas]
10 Hb_025161_060 0.1721154837 - - hypothetical protein JCGZ_23770 [Jatropha curcas]
11 Hb_133926_010 0.1737045977 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
12 Hb_001856_260 0.1742602038 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
13 Hb_001174_040 0.1754974621 - - -
14 Hb_001144_030 0.1774224707 - - hypothetical protein CICLE_v10023280mg, partial [Citrus clementina]
15 Hb_005116_040 0.1842157511 - - PREDICTED: uncharacterized protein LOC105131445 [Populus euphratica]
16 Hb_000086_530 0.1861963869 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000617_070 0.1886955054 - - hypothetical protein POPTR_0005s02420g [Populus trichocarpa]
18 Hb_188281_020 0.1958064362 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
19 Hb_000034_060 0.2022059116 - - PREDICTED: O-acyltransferase WSD1-like [Citrus sinensis]
20 Hb_002031_020 0.2025989269 - - hypothetical protein JCGZ_19971 [Jatropha curcas]

Gene co-expression network

sample Hb_001210_120 Hb_001210_120 Hb_002073_160 Hb_002073_160 Hb_001210_120--Hb_002073_160 Hb_105885_010 Hb_105885_010 Hb_001210_120--Hb_105885_010 Hb_007237_060 Hb_007237_060 Hb_001210_120--Hb_007237_060 Hb_000237_060 Hb_000237_060 Hb_001210_120--Hb_000237_060 Hb_000959_200 Hb_000959_200 Hb_001210_120--Hb_000959_200 Hb_000685_100 Hb_000685_100 Hb_001210_120--Hb_000685_100 Hb_002073_160--Hb_105885_010 Hb_001174_040 Hb_001174_040 Hb_002073_160--Hb_001174_040 Hb_000617_070 Hb_000617_070 Hb_002073_160--Hb_000617_070 Hb_133926_010 Hb_133926_010 Hb_002073_160--Hb_133926_010 Hb_188281_020 Hb_188281_020 Hb_002073_160--Hb_188281_020 Hb_105885_010--Hb_001174_040 Hb_105885_010--Hb_188281_020 Hb_002031_020 Hb_002031_020 Hb_105885_010--Hb_002031_020 Hb_025557_080 Hb_025557_080 Hb_105885_010--Hb_025557_080 Hb_001856_260 Hb_001856_260 Hb_007237_060--Hb_001856_260 Hb_001675_020 Hb_001675_020 Hb_007237_060--Hb_001675_020 Hb_000327_100 Hb_000327_100 Hb_007237_060--Hb_000327_100 Hb_000086_530 Hb_000086_530 Hb_007237_060--Hb_000086_530 Hb_007237_060--Hb_000237_060 Hb_007237_060--Hb_000685_100 Hb_000237_060--Hb_001856_260 Hb_000237_060--Hb_000086_530 Hb_002020_010 Hb_002020_010 Hb_000237_060--Hb_002020_010 Hb_000237_060--Hb_133926_010 Hb_011081_010 Hb_011081_010 Hb_000237_060--Hb_011081_010 Hb_001141_260 Hb_001141_260 Hb_000959_200--Hb_001141_260 Hb_140024_010 Hb_140024_010 Hb_000959_200--Hb_140024_010 Hb_016120_030 Hb_016120_030 Hb_000959_200--Hb_016120_030 Hb_004031_060 Hb_004031_060 Hb_000959_200--Hb_004031_060 Hb_005245_030 Hb_005245_030 Hb_000959_200--Hb_005245_030 Hb_019053_050 Hb_019053_050 Hb_000959_200--Hb_019053_050 Hb_005116_040 Hb_005116_040 Hb_000685_100--Hb_005116_040 Hb_049438_020 Hb_049438_020 Hb_000685_100--Hb_049438_020 Hb_000034_060 Hb_000034_060 Hb_000685_100--Hb_000034_060 Hb_000685_100--Hb_001856_260 Hb_000685_100--Hb_000237_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 1.1696 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.156838 0.179786

CAGE analysis