Hb_133926_010

Information

Type -
Description -
Location Contig133926: 8772-9089
Sequence    

Annotation

kegg
ID rcu:RCOM_0685770
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.23 1.3.1.74)
nr
ID KDP46929.1
description hypothetical protein JCGZ_08917 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LQQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08917 PE=4 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133926_010 0.0 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
2 Hb_011081_010 0.045323366 - - unnamed protein product [Coffea canephora]
3 Hb_141096_010 0.0610050232 - - PREDICTED: zinc finger CCCH domain-containing protein 55-like [Jatropha curcas]
4 Hb_180518_010 0.0889767411 - - PREDICTED: receptor-like protein 2 [Jatropha curcas]
5 Hb_103468_010 0.0923163602 - - protein binding protein, putative [Ricinus communis]
6 Hb_027577_010 0.1047419306 - - PREDICTED: uncharacterized protein LOC104779928 [Camelina sativa]
7 Hb_000868_020 0.1080972544 - - -
8 Hb_005291_020 0.1090010827 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003528_090 0.1144506002 - - Uncharacterized protein TCM_037169 [Theobroma cacao]
10 Hb_002031_020 0.1212377166 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
11 Hb_003060_020 0.1215631108 - - serine carboxypeptidase, putative [Ricinus communis]
12 Hb_000487_350 0.121928547 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000581_010 0.1235099787 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
14 Hb_000237_060 0.1242288315 - - hypothetical protein PRUPE_ppa022052mg, partial [Prunus persica]
15 Hb_002073_160 0.1300129246 - - hypothetical protein JCGZ_21740 [Jatropha curcas]
16 Hb_010327_060 0.1330052425 - - hypothetical protein B456_001G246300 [Gossypium raimondii]
17 Hb_014834_100 0.1332181565 - - PREDICTED: probable aquaporin TIP-type [Gossypium raimondii]
18 Hb_153544_020 0.1341139616 transcription factor TF Family: TCP PREDICTED: transcription factor TCP12 [Jatropha curcas]
19 Hb_000107_240 0.1351949217 - - organic anion transporter, putative [Ricinus communis]
20 Hb_000327_350 0.1383710975 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]

Gene co-expression network

sample Hb_133926_010 Hb_133926_010 Hb_011081_010 Hb_011081_010 Hb_133926_010--Hb_011081_010 Hb_141096_010 Hb_141096_010 Hb_133926_010--Hb_141096_010 Hb_180518_010 Hb_180518_010 Hb_133926_010--Hb_180518_010 Hb_103468_010 Hb_103468_010 Hb_133926_010--Hb_103468_010 Hb_027577_010 Hb_027577_010 Hb_133926_010--Hb_027577_010 Hb_000868_020 Hb_000868_020 Hb_133926_010--Hb_000868_020 Hb_011081_010--Hb_141096_010 Hb_011081_010--Hb_103468_010 Hb_014834_100 Hb_014834_100 Hb_011081_010--Hb_014834_100 Hb_011081_010--Hb_180518_010 Hb_001557_030 Hb_001557_030 Hb_011081_010--Hb_001557_030 Hb_141096_010--Hb_103468_010 Hb_141096_010--Hb_001557_030 Hb_141096_010--Hb_014834_100 Hb_003152_010 Hb_003152_010 Hb_141096_010--Hb_003152_010 Hb_180518_010--Hb_027577_010 Hb_000581_010 Hb_000581_010 Hb_180518_010--Hb_000581_010 Hb_000487_350 Hb_000487_350 Hb_180518_010--Hb_000487_350 Hb_002031_020 Hb_002031_020 Hb_180518_010--Hb_002031_020 Hb_005291_020 Hb_005291_020 Hb_180518_010--Hb_005291_020 Hb_180518_010--Hb_103468_010 Hb_003060_020 Hb_003060_020 Hb_103468_010--Hb_003060_020 Hb_103468_010--Hb_014834_100 Hb_006249_010 Hb_006249_010 Hb_103468_010--Hb_006249_010 Hb_103468_010--Hb_027577_010 Hb_103468_010--Hb_000868_020 Hb_027577_010--Hb_000487_350 Hb_027577_010--Hb_000581_010 Hb_001856_250 Hb_001856_250 Hb_027577_010--Hb_001856_250 Hb_000729_040 Hb_000729_040 Hb_027577_010--Hb_000729_040 Hb_000483_340 Hb_000483_340 Hb_027577_010--Hb_000483_340 Hb_010327_060 Hb_010327_060 Hb_000868_020--Hb_010327_060 Hb_000028_090 Hb_000028_090 Hb_000868_020--Hb_000028_090 Hb_000107_240 Hb_000107_240 Hb_000868_020--Hb_000107_240 Hb_002757_040 Hb_002757_040 Hb_000868_020--Hb_002757_040 Hb_000307_160 Hb_000307_160 Hb_000868_020--Hb_000307_160 Hb_000868_020--Hb_006249_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.223282 5.81064 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.234162 0.814477

CAGE analysis