Hb_002073_160

Information

Type -
Description -
Location Contig2073: 104017-104322
Sequence    

Annotation

kegg
ID rcu:RCOM_0699440
description hypothetical protein
nr
ID KDP21269.1
description hypothetical protein JCGZ_21740 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JP28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21740 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002073_160 0.0 - - hypothetical protein JCGZ_21740 [Jatropha curcas]
2 Hb_105885_010 0.0322383385 - - PREDICTED: uncharacterized protein LOC103441690 [Malus domestica]
3 Hb_001174_040 0.0833515886 - - -
4 Hb_001210_120 0.1054950139 - - hypothetical protein JCGZ_06226 [Jatropha curcas]
5 Hb_000617_070 0.1184910635 - - hypothetical protein POPTR_0005s02420g [Populus trichocarpa]
6 Hb_133926_010 0.1300129246 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
7 Hb_188281_020 0.1329110108 - - PREDICTED: uncharacterized protein LOC105629522 [Jatropha curcas]
8 Hb_025557_080 0.1341738014 transcription factor TF Family: zf-HD -
9 Hb_002031_020 0.1364193888 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
10 Hb_004449_100 0.1452193472 - - -
11 Hb_005841_070 0.1456894555 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000480_020 0.1466768075 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000155_130 0.1480171722 - - conserved hypothetical protein [Ricinus communis]
14 Hb_025557_070 0.1489019351 transcription factor TF Family: zf-HD hypothetical protein JCGZ_11626 [Jatropha curcas]
15 Hb_180518_010 0.1490729624 - - PREDICTED: receptor-like protein 2 [Jatropha curcas]
16 Hb_000581_010 0.151654057 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
17 Hb_000487_350 0.1537379116 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000594_010 0.1601979513 - - PREDICTED: lysine histidine transporter-like 6 isoform X3 [Populus euphratica]
19 Hb_001141_260 0.1610501657 - - Uncharacterized protein TCM_020647 [Theobroma cacao]
20 Hb_027577_010 0.1635711265 - - PREDICTED: uncharacterized protein LOC104779928 [Camelina sativa]

Gene co-expression network

sample Hb_002073_160 Hb_002073_160 Hb_105885_010 Hb_105885_010 Hb_002073_160--Hb_105885_010 Hb_001174_040 Hb_001174_040 Hb_002073_160--Hb_001174_040 Hb_001210_120 Hb_001210_120 Hb_002073_160--Hb_001210_120 Hb_000617_070 Hb_000617_070 Hb_002073_160--Hb_000617_070 Hb_133926_010 Hb_133926_010 Hb_002073_160--Hb_133926_010 Hb_188281_020 Hb_188281_020 Hb_002073_160--Hb_188281_020 Hb_105885_010--Hb_001174_040 Hb_105885_010--Hb_188281_020 Hb_105885_010--Hb_001210_120 Hb_002031_020 Hb_002031_020 Hb_105885_010--Hb_002031_020 Hb_025557_080 Hb_025557_080 Hb_105885_010--Hb_025557_080 Hb_001174_040--Hb_000617_070 Hb_005841_070 Hb_005841_070 Hb_001174_040--Hb_005841_070 Hb_000480_020 Hb_000480_020 Hb_001174_040--Hb_000480_020 Hb_009620_080 Hb_009620_080 Hb_001174_040--Hb_009620_080 Hb_007237_060 Hb_007237_060 Hb_001210_120--Hb_007237_060 Hb_000237_060 Hb_000237_060 Hb_001210_120--Hb_000237_060 Hb_000959_200 Hb_000959_200 Hb_001210_120--Hb_000959_200 Hb_000685_100 Hb_000685_100 Hb_001210_120--Hb_000685_100 Hb_009470_010 Hb_009470_010 Hb_000617_070--Hb_009470_010 Hb_001141_260 Hb_001141_260 Hb_000617_070--Hb_001141_260 Hb_027472_250 Hb_027472_250 Hb_000617_070--Hb_027472_250 Hb_000617_070--Hb_009620_080 Hb_001956_170 Hb_001956_170 Hb_000617_070--Hb_001956_170 Hb_011081_010 Hb_011081_010 Hb_133926_010--Hb_011081_010 Hb_141096_010 Hb_141096_010 Hb_133926_010--Hb_141096_010 Hb_180518_010 Hb_180518_010 Hb_133926_010--Hb_180518_010 Hb_103468_010 Hb_103468_010 Hb_133926_010--Hb_103468_010 Hb_027577_010 Hb_027577_010 Hb_133926_010--Hb_027577_010 Hb_000868_020 Hb_000868_020 Hb_133926_010--Hb_000868_020 Hb_188281_020--Hb_002031_020 Hb_003788_030 Hb_003788_030 Hb_188281_020--Hb_003788_030 Hb_000581_010 Hb_000581_010 Hb_188281_020--Hb_000581_010 Hb_188281_020--Hb_025557_080 Hb_025557_070 Hb_025557_070 Hb_188281_020--Hb_025557_070 Hb_000487_350 Hb_000487_350 Hb_188281_020--Hb_000487_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 2.58344 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.129782 0.438025

CAGE analysis