Hb_000034_060

Information

Type -
Description -
Location Contig34: 142832-144232
Sequence    

Annotation

kegg
ID cit:102629948
description O-acyltransferase WSD1-like
nr
ID XP_006478431.1
description PREDICTED: O-acyltransferase WSD1-like [Citrus sinensis]
swissprot
ID Q93ZR6
description O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
trembl
ID A0A067D6Y5
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041931mg PE=4 SV=1
Gene Ontology
ID GO:0004144
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000034_060 0.0 - - PREDICTED: O-acyltransferase WSD1-like [Citrus sinensis]
2 Hb_031579_010 0.0991996405 - - JHL22C18.10 [Jatropha curcas]
3 Hb_146036_010 0.1001783941 - - hypothetical protein B456_005G052500 [Gossypium raimondii]
4 Hb_000685_100 0.1252046189 - - hypothetical protein POPTR_0001s10630g [Populus trichocarpa]
5 Hb_002370_020 0.1369741076 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
6 Hb_000917_030 0.1370454759 - - PREDICTED: uncharacterized protein LOC102629571 [Citrus sinensis]
7 Hb_000910_030 0.1372893984 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000237_060 0.1401630869 - - hypothetical protein PRUPE_ppa022052mg, partial [Prunus persica]
9 Hb_003968_030 0.1404926127 - - UDP-glucosyltransferase, putative [Ricinus communis]
10 Hb_001856_260 0.1414611536 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
11 Hb_003371_280 0.1452613375 - - unnamed protein product [Vitis vinifera]
12 Hb_005116_040 0.1454152387 - - PREDICTED: uncharacterized protein LOC105131445 [Populus euphratica]
13 Hb_005332_160 0.1465069188 - - PREDICTED: BAG family molecular chaperone regulator 2-like [Jatropha curcas]
14 Hb_006386_010 0.1486156964 - - PREDICTED: polygalacturonase QRT3 [Jatropha curcas]
15 Hb_003607_090 0.1507914857 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
16 Hb_001410_080 0.1513936169 - - ring finger protein, putative [Ricinus communis]
17 Hb_001268_290 0.153134254 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
18 Hb_007237_060 0.1567555086 - - -
19 Hb_000866_400 0.1571774073 - - -
20 Hb_003055_100 0.1576805863 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]

Gene co-expression network

sample Hb_000034_060 Hb_000034_060 Hb_031579_010 Hb_031579_010 Hb_000034_060--Hb_031579_010 Hb_146036_010 Hb_146036_010 Hb_000034_060--Hb_146036_010 Hb_000685_100 Hb_000685_100 Hb_000034_060--Hb_000685_100 Hb_002370_020 Hb_002370_020 Hb_000034_060--Hb_002370_020 Hb_000917_030 Hb_000917_030 Hb_000034_060--Hb_000917_030 Hb_000910_030 Hb_000910_030 Hb_000034_060--Hb_000910_030 Hb_000633_030 Hb_000633_030 Hb_031579_010--Hb_000633_030 Hb_010193_020 Hb_010193_020 Hb_031579_010--Hb_010193_020 Hb_000866_400 Hb_000866_400 Hb_031579_010--Hb_000866_400 Hb_011709_010 Hb_011709_010 Hb_031579_010--Hb_011709_010 Hb_000620_050 Hb_000620_050 Hb_031579_010--Hb_000620_050 Hb_000186_150 Hb_000186_150 Hb_146036_010--Hb_000186_150 Hb_003968_030 Hb_003968_030 Hb_146036_010--Hb_003968_030 Hb_001430_040 Hb_001430_040 Hb_146036_010--Hb_001430_040 Hb_003124_050 Hb_003124_050 Hb_146036_010--Hb_003124_050 Hb_005332_160 Hb_005332_160 Hb_146036_010--Hb_005332_160 Hb_007237_060 Hb_007237_060 Hb_000685_100--Hb_007237_060 Hb_005116_040 Hb_005116_040 Hb_000685_100--Hb_005116_040 Hb_049438_020 Hb_049438_020 Hb_000685_100--Hb_049438_020 Hb_001856_260 Hb_001856_260 Hb_000685_100--Hb_001856_260 Hb_000237_060 Hb_000237_060 Hb_000685_100--Hb_000237_060 Hb_002370_020--Hb_000866_400 Hb_149507_010 Hb_149507_010 Hb_002370_020--Hb_149507_010 Hb_025623_010 Hb_025623_010 Hb_002370_020--Hb_025623_010 Hb_003371_280 Hb_003371_280 Hb_002370_020--Hb_003371_280 Hb_001269_660 Hb_001269_660 Hb_002370_020--Hb_001269_660 Hb_002374_510 Hb_002374_510 Hb_002370_020--Hb_002374_510 Hb_000917_030--Hb_031579_010 Hb_003055_100 Hb_003055_100 Hb_000917_030--Hb_003055_100 Hb_000917_030--Hb_005116_040 Hb_002031_020 Hb_002031_020 Hb_000917_030--Hb_002031_020 Hb_000917_030--Hb_000633_030 Hb_003607_090 Hb_003607_090 Hb_000910_030--Hb_003607_090 Hb_000910_030--Hb_005332_160 Hb_000659_050 Hb_000659_050 Hb_000910_030--Hb_000659_050 Hb_001410_080 Hb_001410_080 Hb_000910_030--Hb_001410_080 Hb_000344_030 Hb_000344_030 Hb_000910_030--Hb_000344_030 Hb_002869_090 Hb_002869_090 Hb_000910_030--Hb_002869_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0340506 0.455188 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0800393 0.162883

CAGE analysis