Hb_003124_050

Information

Type -
Description -
Location Contig3124: 20695-20999
Sequence    

Annotation

kegg
ID fve:101311339
description uncharacterized protein LOC101311339
nr
ID XP_012081361.1
description PREDICTED: uncharacterized protein LOC105641435 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K4K4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18755 PE=4 SV=1
Gene Ontology
ID GO:0005774
description PREDICTED: uncharacterized protein LOC105641435

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33012: 20885-20991
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003124_050 0.0 - - PREDICTED: uncharacterized protein LOC105641435 [Jatropha curcas]
2 Hb_000186_150 0.0571066576 - - PREDICTED: light-induced protein, chloroplastic-like [Nicotiana sylvestris]
3 Hb_001430_040 0.0643585255 - - gamma-tocopherol methyltransferase [Hevea brasiliensis]
4 Hb_007684_010 0.0889448002 - - conserved hypothetical protein [Ricinus communis]
5 Hb_146036_010 0.111692034 - - hypothetical protein B456_005G052500 [Gossypium raimondii]
6 Hb_000635_100 0.1191938636 - - -
7 Hb_002783_180 0.1209309849 - - Tubulin beta-6 chain [Gossypium arboreum]
8 Hb_009456_010 0.1249460364 - - PREDICTED: cinnamoyl-CoA reductase 1-like isoform X3 [Populus euphratica]
9 Hb_002566_020 0.1255285068 - - hypothetical protein JCGZ_15085 [Jatropha curcas]
10 Hb_003968_030 0.126475346 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_168561_010 0.1377852744 - - PREDICTED: notchless protein homolog [Jatropha curcas]
12 Hb_000668_050 0.1405153902 - - phosphoglycerate mutase, putative [Ricinus communis]
13 Hb_000639_010 0.144609996 transcription factor TF Family: ERF hypothetical protein JCGZ_09727 [Jatropha curcas]
14 Hb_001777_010 0.1478013999 - - -
15 Hb_010264_020 0.1505173861 - - unnamed protein product [Vitis vinifera]
16 Hb_000389_100 0.1595908578 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
17 Hb_049438_020 0.1658248534 - - PREDICTED: peroxidase 20 [Jatropha curcas]
18 Hb_003754_020 0.1668719946 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_006499_020 0.167224761 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
20 Hb_002097_180 0.1705582473 - - PREDICTED: probable pectate lyase 12 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003124_050 Hb_003124_050 Hb_000186_150 Hb_000186_150 Hb_003124_050--Hb_000186_150 Hb_001430_040 Hb_001430_040 Hb_003124_050--Hb_001430_040 Hb_007684_010 Hb_007684_010 Hb_003124_050--Hb_007684_010 Hb_146036_010 Hb_146036_010 Hb_003124_050--Hb_146036_010 Hb_000635_100 Hb_000635_100 Hb_003124_050--Hb_000635_100 Hb_002783_180 Hb_002783_180 Hb_003124_050--Hb_002783_180 Hb_000186_150--Hb_001430_040 Hb_000186_150--Hb_146036_010 Hb_003968_030 Hb_003968_030 Hb_000186_150--Hb_003968_030 Hb_000186_150--Hb_000635_100 Hb_000186_150--Hb_002783_180 Hb_001430_040--Hb_003968_030 Hb_001430_040--Hb_000635_100 Hb_001430_040--Hb_146036_010 Hb_010264_020 Hb_010264_020 Hb_001430_040--Hb_010264_020 Hb_000668_050 Hb_000668_050 Hb_007684_010--Hb_000668_050 Hb_003754_020 Hb_003754_020 Hb_007684_010--Hb_003754_020 Hb_002097_180 Hb_002097_180 Hb_007684_010--Hb_002097_180 Hb_003189_010 Hb_003189_010 Hb_007684_010--Hb_003189_010 Hb_002818_170 Hb_002818_170 Hb_007684_010--Hb_002818_170 Hb_146036_010--Hb_003968_030 Hb_000034_060 Hb_000034_060 Hb_146036_010--Hb_000034_060 Hb_005332_160 Hb_005332_160 Hb_146036_010--Hb_005332_160 Hb_000635_100--Hb_003968_030 Hb_000639_010 Hb_000639_010 Hb_000635_100--Hb_000639_010 Hb_000635_100--Hb_010264_020 Hb_001277_010 Hb_001277_010 Hb_000635_100--Hb_001277_010 Hb_002566_020 Hb_002566_020 Hb_002783_180--Hb_002566_020 Hb_009456_010 Hb_009456_010 Hb_002783_180--Hb_009456_010 Hb_008304_050 Hb_008304_050 Hb_002783_180--Hb_008304_050 Hb_004162_140 Hb_004162_140 Hb_002783_180--Hb_004162_140 Hb_000389_100 Hb_000389_100 Hb_002783_180--Hb_000389_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.17477 3.61927 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.50753 1.22487

CAGE analysis