Hb_000866_400

Information

Type -
Description -
Location Contig866: 273735-274120
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60981: 273652-273854
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_400 0.0 - - -
2 Hb_025623_010 0.0546677864 - - -
3 Hb_002370_020 0.0623203785 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
4 Hb_011501_020 0.0997047359 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
5 Hb_000620_050 0.1014283584 - - PREDICTED: uncharacterized protein LOC105649924 [Jatropha curcas]
6 Hb_031579_010 0.1087609529 - - JHL22C18.10 [Jatropha curcas]
7 Hb_149507_010 0.1088493231 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
8 Hb_003371_280 0.1115065542 - - unnamed protein product [Vitis vinifera]
9 Hb_011709_010 0.1123965577 - - PREDICTED: phytosulfokine receptor 1-like [Jatropha curcas]
10 Hb_022973_010 0.1148456853 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Jatropha curcas]
11 Hb_001269_660 0.1209927727 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
12 Hb_121624_010 0.121627328 - - PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
13 Hb_011519_040 0.1276599337 - - hypothetical protein POPTR_0015s04770g [Populus trichocarpa]
14 Hb_000402_060 0.1288142997 - - PREDICTED: uncharacterized protein LOC105644642 isoform X2 [Jatropha curcas]
15 Hb_010193_020 0.1297401679 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
16 Hb_000749_280 0.1366340837 - - PREDICTED: uncharacterized protein LOC105138169 [Populus euphratica]
17 Hb_002925_060 0.1393034216 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01547 [Jatropha curcas]
18 Hb_002374_510 0.1421519983 - - Esterase precursor, putative [Ricinus communis]
19 Hb_003058_240 0.1425661972 - - PREDICTED: tubulin beta-5 chain-like [Jatropha curcas]
20 Hb_001277_010 0.1439807658 - - unknown [Populus trichocarpa]

Gene co-expression network

sample Hb_000866_400 Hb_000866_400 Hb_025623_010 Hb_025623_010 Hb_000866_400--Hb_025623_010 Hb_002370_020 Hb_002370_020 Hb_000866_400--Hb_002370_020 Hb_011501_020 Hb_011501_020 Hb_000866_400--Hb_011501_020 Hb_000620_050 Hb_000620_050 Hb_000866_400--Hb_000620_050 Hb_031579_010 Hb_031579_010 Hb_000866_400--Hb_031579_010 Hb_149507_010 Hb_149507_010 Hb_000866_400--Hb_149507_010 Hb_025623_010--Hb_011501_020 Hb_025623_010--Hb_002370_020 Hb_121624_010 Hb_121624_010 Hb_025623_010--Hb_121624_010 Hb_025623_010--Hb_149507_010 Hb_001269_660 Hb_001269_660 Hb_025623_010--Hb_001269_660 Hb_002370_020--Hb_149507_010 Hb_003371_280 Hb_003371_280 Hb_002370_020--Hb_003371_280 Hb_002370_020--Hb_001269_660 Hb_002374_510 Hb_002374_510 Hb_002370_020--Hb_002374_510 Hb_000343_090 Hb_000343_090 Hb_011501_020--Hb_000343_090 Hb_002245_060 Hb_002245_060 Hb_011501_020--Hb_002245_060 Hb_005622_040 Hb_005622_040 Hb_011501_020--Hb_005622_040 Hb_011501_020--Hb_121624_010 Hb_002925_060 Hb_002925_060 Hb_000620_050--Hb_002925_060 Hb_184074_010 Hb_184074_010 Hb_000620_050--Hb_184074_010 Hb_000620_050--Hb_003371_280 Hb_182869_010 Hb_182869_010 Hb_000620_050--Hb_182869_010 Hb_003058_240 Hb_003058_240 Hb_000620_050--Hb_003058_240 Hb_011519_040 Hb_011519_040 Hb_000620_050--Hb_011519_040 Hb_000034_060 Hb_000034_060 Hb_031579_010--Hb_000034_060 Hb_000633_030 Hb_000633_030 Hb_031579_010--Hb_000633_030 Hb_010193_020 Hb_010193_020 Hb_031579_010--Hb_010193_020 Hb_011709_010 Hb_011709_010 Hb_031579_010--Hb_011709_010 Hb_031579_010--Hb_000620_050 Hb_149507_010--Hb_001269_660 Hb_012395_060 Hb_012395_060 Hb_149507_010--Hb_012395_060 Hb_001277_010 Hb_001277_010 Hb_149507_010--Hb_001277_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.524362 3.54662 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.521472 2.72164

CAGE analysis