Hb_002245_060

Information

Type -
Description -
Location Contig2245: 117624-120924
Sequence    

Annotation

kegg
ID rcu:RCOM_0181420
description kinesin, putative
nr
ID XP_012070721.1
description PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
swissprot
ID P46864
description Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1
trembl
ID A0A067L3F5
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_00797 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-3 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23346: 117560-120848
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002245_060 0.0 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
2 Hb_000122_230 0.0706094009 - - laccase, putative [Ricinus communis]
3 Hb_000654_020 0.0768608035 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
4 Hb_007620_020 0.0802877356 - - PREDICTED: cationic amino acid transporter 7, chloroplastic-like isoform X1 [Jatropha curcas]
5 Hb_000670_070 0.0849363017 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
6 Hb_001408_200 0.087370141 - - hypothetical protein JCGZ_08964 [Jatropha curcas]
7 Hb_005539_150 0.089679339 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Jatropha curcas]
8 Hb_121624_010 0.0965288789 - - PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
9 Hb_000265_030 0.0973245448 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
10 Hb_000402_060 0.0995604893 - - PREDICTED: uncharacterized protein LOC105644642 isoform X2 [Jatropha curcas]
11 Hb_011501_020 0.1017079911 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
12 Hb_089124_010 0.1040387721 - - hypothetical protein POPTR_0018s09540g [Populus trichocarpa]
13 Hb_010883_160 0.1040470524 - - PREDICTED: pathogenesis-related protein 5 isoform X1 [Jatropha curcas]
14 Hb_000608_190 0.1086142004 rubber biosynthesis Gene Name: Isopentenyl-diphosphate delta isomerase PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Jatropha curcas]
15 Hb_001269_660 0.1138713622 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
16 Hb_011519_040 0.1160211073 - - hypothetical protein POPTR_0015s04770g [Populus trichocarpa]
17 Hb_004837_080 0.1163232255 transcription factor TF Family: MYB PREDICTED: transcription factor MYB46 [Jatropha curcas]
18 Hb_002400_300 0.1184396537 - - PREDICTED: synaptotagmin-4 [Jatropha curcas]
19 Hb_080797_010 0.1200922811 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Citrus sinensis]
20 Hb_025623_010 0.1232475641 - - -

Gene co-expression network

sample Hb_002245_060 Hb_002245_060 Hb_000122_230 Hb_000122_230 Hb_002245_060--Hb_000122_230 Hb_000654_020 Hb_000654_020 Hb_002245_060--Hb_000654_020 Hb_007620_020 Hb_007620_020 Hb_002245_060--Hb_007620_020 Hb_000670_070 Hb_000670_070 Hb_002245_060--Hb_000670_070 Hb_001408_200 Hb_001408_200 Hb_002245_060--Hb_001408_200 Hb_005539_150 Hb_005539_150 Hb_002245_060--Hb_005539_150 Hb_004837_080 Hb_004837_080 Hb_000122_230--Hb_004837_080 Hb_000122_230--Hb_001408_200 Hb_080797_010 Hb_080797_010 Hb_000122_230--Hb_080797_010 Hb_000254_080 Hb_000254_080 Hb_000122_230--Hb_000254_080 Hb_000122_230--Hb_007620_020 Hb_010883_160 Hb_010883_160 Hb_000654_020--Hb_010883_160 Hb_000809_010 Hb_000809_010 Hb_000654_020--Hb_000809_010 Hb_000654_020--Hb_005539_150 Hb_008441_010 Hb_008441_010 Hb_000654_020--Hb_008441_010 Hb_000402_060 Hb_000402_060 Hb_000654_020--Hb_000402_060 Hb_089124_010 Hb_089124_010 Hb_007620_020--Hb_089124_010 Hb_000608_190 Hb_000608_190 Hb_007620_020--Hb_000608_190 Hb_007620_020--Hb_000670_070 Hb_007620_020--Hb_004837_080 Hb_000670_070--Hb_000608_190 Hb_000424_140 Hb_000424_140 Hb_000670_070--Hb_000424_140 Hb_005842_010 Hb_005842_010 Hb_000670_070--Hb_005842_010 Hb_000670_070--Hb_000654_020 Hb_001408_200--Hb_000402_060 Hb_002925_060 Hb_002925_060 Hb_001408_200--Hb_002925_060 Hb_003152_020 Hb_003152_020 Hb_001408_200--Hb_003152_020 Hb_001397_020 Hb_001397_020 Hb_001408_200--Hb_001397_020 Hb_003058_240 Hb_003058_240 Hb_001408_200--Hb_003058_240 Hb_000477_090 Hb_000477_090 Hb_005539_150--Hb_000477_090 Hb_029386_010 Hb_029386_010 Hb_005539_150--Hb_029386_010 Hb_008253_050 Hb_008253_050 Hb_005539_150--Hb_008253_050 Hb_005539_150--Hb_000670_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.996049 5.72124 21.366 0 0.025947
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0233676 0 3.67287 30.4125

CAGE analysis