Hb_025623_010

Information

Type -
Description -
Location Contig25623: 6187-8414
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025623_010 0.0 - - -
2 Hb_011501_020 0.0506490669 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
3 Hb_000866_400 0.0546677864 - - -
4 Hb_002370_020 0.0769284844 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
5 Hb_121624_010 0.1051407946 - - PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
6 Hb_149507_010 0.105869282 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
7 Hb_001269_660 0.1066815995 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
8 Hb_022973_010 0.1141704449 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Jatropha curcas]
9 Hb_001104_220 0.1227894378 - - PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
10 Hb_002245_060 0.1232475641 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
11 Hb_001277_010 0.1236961248 - - unknown [Populus trichocarpa]
12 Hb_011519_040 0.1252730823 - - hypothetical protein POPTR_0015s04770g [Populus trichocarpa]
13 Hb_000654_020 0.125941309 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
14 Hb_008441_010 0.12943116 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
15 Hb_000402_060 0.1301490004 - - PREDICTED: uncharacterized protein LOC105644642 isoform X2 [Jatropha curcas]
16 Hb_000620_050 0.1320950215 - - PREDICTED: uncharacterized protein LOC105649924 [Jatropha curcas]
17 Hb_000809_010 0.1338122724 - - hypothetical protein JCGZ_12342 [Jatropha curcas]
18 Hb_003371_280 0.1345447339 - - unnamed protein product [Vitis vinifera]
19 Hb_000343_090 0.136801115 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
20 Hb_000749_280 0.1384933146 - - PREDICTED: uncharacterized protein LOC105138169 [Populus euphratica]

Gene co-expression network

sample Hb_025623_010 Hb_025623_010 Hb_011501_020 Hb_011501_020 Hb_025623_010--Hb_011501_020 Hb_000866_400 Hb_000866_400 Hb_025623_010--Hb_000866_400 Hb_002370_020 Hb_002370_020 Hb_025623_010--Hb_002370_020 Hb_121624_010 Hb_121624_010 Hb_025623_010--Hb_121624_010 Hb_149507_010 Hb_149507_010 Hb_025623_010--Hb_149507_010 Hb_001269_660 Hb_001269_660 Hb_025623_010--Hb_001269_660 Hb_000343_090 Hb_000343_090 Hb_011501_020--Hb_000343_090 Hb_011501_020--Hb_000866_400 Hb_002245_060 Hb_002245_060 Hb_011501_020--Hb_002245_060 Hb_005622_040 Hb_005622_040 Hb_011501_020--Hb_005622_040 Hb_011501_020--Hb_121624_010 Hb_000866_400--Hb_002370_020 Hb_000620_050 Hb_000620_050 Hb_000866_400--Hb_000620_050 Hb_031579_010 Hb_031579_010 Hb_000866_400--Hb_031579_010 Hb_000866_400--Hb_149507_010 Hb_002370_020--Hb_149507_010 Hb_003371_280 Hb_003371_280 Hb_002370_020--Hb_003371_280 Hb_002370_020--Hb_001269_660 Hb_002374_510 Hb_002374_510 Hb_002370_020--Hb_002374_510 Hb_121624_010--Hb_002245_060 Hb_121624_010--Hb_001269_660 Hb_001408_200 Hb_001408_200 Hb_121624_010--Hb_001408_200 Hb_000402_060 Hb_000402_060 Hb_121624_010--Hb_000402_060 Hb_149507_010--Hb_001269_660 Hb_012395_060 Hb_012395_060 Hb_149507_010--Hb_012395_060 Hb_001277_010 Hb_001277_010 Hb_149507_010--Hb_001277_010 Hb_001269_660--Hb_012395_060 Hb_010264_010 Hb_010264_010 Hb_001269_660--Hb_010264_010 Hb_001269_660--Hb_001277_010 Hb_002518_230 Hb_002518_230 Hb_001269_660--Hb_002518_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.263078 1.38389 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.273688 1.3657

CAGE analysis