Hb_010264_010

Information

Type -
Description -
Location Contig10264: 4288-14242
Sequence    

Annotation

kegg
ID pop:POPTR_0008s01110g
description POPTRDRAFT_1084116; hypothetical protein
nr
ID XP_012084909.1
description PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Jatropha curcas]
swissprot
ID Q94BZ1
description Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1
trembl
ID A0A067K5I7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22071 PE=4 SV=1
Gene Ontology
ID GO:0016021
description protein zinc induced facilitator-like 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01115: 4610-9032 , PASA_asmbl_01116: 9072-9702 , PASA_asmbl_01117: 12825-54785
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010264_010 0.0 - - PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Jatropha curcas]
2 Hb_032143_010 0.0764032031 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
3 Hb_000017_140 0.0873441106 - - polygalacturonase, putative [Ricinus communis]
4 Hb_001269_660 0.0939158165 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
5 Hb_000265_030 0.1025628372 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
6 Hb_000665_210 0.1064187574 - - PREDICTED: synaptotagmin-4 [Jatropha curcas]
7 Hb_007101_140 0.108073692 - - hypothetical protein JCGZ_21777 [Jatropha curcas]
8 Hb_001104_220 0.1121394403 - - PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
9 Hb_000621_030 0.115009585 - - PREDICTED: uncharacterized protein LOC105638736 isoform X1 [Jatropha curcas]
10 Hb_002001_030 0.1150643695 - - Plasma membrane ATPase 4 [Gossypium arboreum]
11 Hb_000784_060 0.1153356315 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001277_010 0.1191346359 - - unknown [Populus trichocarpa]
13 Hb_006142_050 0.120620118 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
14 Hb_082550_010 0.1245582995 - - hypothetical protein CISIN_1g0081081mg, partial [Citrus sinensis]
15 Hb_149507_010 0.1283485088 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Malus domestica]
16 Hb_004162_140 0.1301225958 - - PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]
17 Hb_007894_080 0.1306383206 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004466_090 0.1309946452 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002518_230 0.1325310161 - - -
20 Hb_000152_880 0.1346242709 - - -

Gene co-expression network

sample Hb_010264_010 Hb_010264_010 Hb_032143_010 Hb_032143_010 Hb_010264_010--Hb_032143_010 Hb_000017_140 Hb_000017_140 Hb_010264_010--Hb_000017_140 Hb_001269_660 Hb_001269_660 Hb_010264_010--Hb_001269_660 Hb_000265_030 Hb_000265_030 Hb_010264_010--Hb_000265_030 Hb_000665_210 Hb_000665_210 Hb_010264_010--Hb_000665_210 Hb_007101_140 Hb_007101_140 Hb_010264_010--Hb_007101_140 Hb_032143_010--Hb_000265_030 Hb_001104_220 Hb_001104_220 Hb_032143_010--Hb_001104_220 Hb_005622_040 Hb_005622_040 Hb_032143_010--Hb_005622_040 Hb_006142_050 Hb_006142_050 Hb_032143_010--Hb_006142_050 Hb_181463_020 Hb_181463_020 Hb_032143_010--Hb_181463_020 Hb_000152_880 Hb_000152_880 Hb_000017_140--Hb_000152_880 Hb_007894_080 Hb_007894_080 Hb_000017_140--Hb_007894_080 Hb_000017_140--Hb_007101_140 Hb_004466_090 Hb_004466_090 Hb_000017_140--Hb_004466_090 Hb_004804_010 Hb_004804_010 Hb_000017_140--Hb_004804_010 Hb_149507_010 Hb_149507_010 Hb_001269_660--Hb_149507_010 Hb_012395_060 Hb_012395_060 Hb_001269_660--Hb_012395_060 Hb_121624_010 Hb_121624_010 Hb_001269_660--Hb_121624_010 Hb_001277_010 Hb_001277_010 Hb_001269_660--Hb_001277_010 Hb_002518_230 Hb_002518_230 Hb_001269_660--Hb_002518_230 Hb_002740_060 Hb_002740_060 Hb_000265_030--Hb_002740_060 Hb_000265_030--Hb_005622_040 Hb_002245_060 Hb_002245_060 Hb_000265_030--Hb_002245_060 Hb_005539_150 Hb_005539_150 Hb_000265_030--Hb_005539_150 Hb_009421_070 Hb_009421_070 Hb_000665_210--Hb_009421_070 Hb_000784_060 Hb_000784_060 Hb_000665_210--Hb_000784_060 Hb_001098_040 Hb_001098_040 Hb_000665_210--Hb_001098_040 Hb_000076_060 Hb_000076_060 Hb_000665_210--Hb_000076_060 Hb_000424_140 Hb_000424_140 Hb_000665_210--Hb_000424_140 Hb_000977_020 Hb_000977_020 Hb_000665_210--Hb_000977_020 Hb_007101_140--Hb_000152_880 Hb_007101_140--Hb_007894_080 Hb_029639_030 Hb_029639_030 Hb_007101_140--Hb_029639_030 Hb_000181_220 Hb_000181_220 Hb_007101_140--Hb_000181_220 Hb_004162_140 Hb_004162_140 Hb_007101_140--Hb_004162_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.445521 4.50157 9.09912 0.0428623 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0489096 0.0384683 0 3.26192 10.9609

CAGE analysis