Hb_001104_220

Information

Type -
Description -
Location Contig1104: 275944-276519
Sequence    

Annotation

kegg
ID rcu:RCOM_0383560
description hypothetical protein
nr
ID XP_012066440.1
description PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2J2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23621 PE=4 SV=1
Gene Ontology
ID GO:0007165
description PREDICTED: uncharacterized protein LOC105629453

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001104_220 0.0 - - PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
2 Hb_005622_040 0.069178724 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
3 Hb_001277_010 0.0906657288 - - unknown [Populus trichocarpa]
4 Hb_008253_050 0.0936420043 transcription factor TF Family: MYB hypothetical protein POPTR_0001s36220g [Populus trichocarpa]
5 Hb_041139_010 0.0990401204 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
6 Hb_032143_010 0.1000897855 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
7 Hb_008441_010 0.1005413814 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
8 Hb_000265_030 0.1041581068 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
9 Hb_011501_020 0.109828464 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
10 Hb_010264_010 0.1121394403 - - PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Jatropha curcas]
11 Hb_002001_030 0.1191371449 - - Plasma membrane ATPase 4 [Gossypium arboreum]
12 Hb_025623_010 0.1227894378 - - -
13 Hb_002740_060 0.1233174067 - - PREDICTED: pectin acetylesterase 12 [Jatropha curcas]
14 Hb_001269_660 0.1285693054 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
15 Hb_000654_020 0.1306321233 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
16 Hb_005539_150 0.1313165499 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Jatropha curcas]
17 Hb_001384_040 0.1338486647 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
18 Hb_002245_060 0.134507103 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
19 Hb_113379_010 0.138118158 - - PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1 [Jatropha curcas]
20 Hb_011618_010 0.1386736386 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]

Gene co-expression network

sample Hb_001104_220 Hb_001104_220 Hb_005622_040 Hb_005622_040 Hb_001104_220--Hb_005622_040 Hb_001277_010 Hb_001277_010 Hb_001104_220--Hb_001277_010 Hb_008253_050 Hb_008253_050 Hb_001104_220--Hb_008253_050 Hb_041139_010 Hb_041139_010 Hb_001104_220--Hb_041139_010 Hb_032143_010 Hb_032143_010 Hb_001104_220--Hb_032143_010 Hb_008441_010 Hb_008441_010 Hb_001104_220--Hb_008441_010 Hb_002740_060 Hb_002740_060 Hb_005622_040--Hb_002740_060 Hb_000265_030 Hb_000265_030 Hb_005622_040--Hb_000265_030 Hb_005622_040--Hb_008253_050 Hb_097783_030 Hb_097783_030 Hb_005622_040--Hb_097783_030 Hb_011501_020 Hb_011501_020 Hb_005622_040--Hb_011501_020 Hb_149507_010 Hb_149507_010 Hb_001277_010--Hb_149507_010 Hb_001269_660 Hb_001269_660 Hb_001277_010--Hb_001269_660 Hb_000635_100 Hb_000635_100 Hb_001277_010--Hb_000635_100 Hb_000941_110 Hb_000941_110 Hb_001277_010--Hb_000941_110 Hb_001277_010--Hb_008441_010 Hb_008253_050--Hb_041139_010 Hb_011618_010 Hb_011618_010 Hb_008253_050--Hb_011618_010 Hb_001894_100 Hb_001894_100 Hb_008253_050--Hb_001894_100 Hb_005348_050 Hb_005348_050 Hb_008253_050--Hb_005348_050 Hb_000223_090 Hb_000223_090 Hb_008253_050--Hb_000223_090 Hb_005539_150 Hb_005539_150 Hb_008253_050--Hb_005539_150 Hb_041139_010--Hb_011618_010 Hb_041139_010--Hb_008441_010 Hb_002001_030 Hb_002001_030 Hb_041139_010--Hb_002001_030 Hb_041139_010--Hb_001894_100 Hb_172426_070 Hb_172426_070 Hb_041139_010--Hb_172426_070 Hb_010264_010 Hb_010264_010 Hb_032143_010--Hb_010264_010 Hb_032143_010--Hb_000265_030 Hb_032143_010--Hb_005622_040 Hb_006142_050 Hb_006142_050 Hb_032143_010--Hb_006142_050 Hb_181463_020 Hb_181463_020 Hb_032143_010--Hb_181463_020 Hb_000809_010 Hb_000809_010 Hb_008441_010--Hb_000809_010 Hb_000654_020 Hb_000654_020 Hb_008441_010--Hb_000654_020 Hb_008441_010--Hb_008253_050 Hb_002073_130 Hb_002073_130 Hb_008441_010--Hb_002073_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.218127 0.445209 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.138755 0.648694

CAGE analysis