Hb_172426_070

Information

Type -
Description -
Location Contig172426: 41885-43739
Sequence    

Annotation

kegg
ID rcu:RCOM_1288540
description hypothetical protein
nr
ID XP_012072186.1
description PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
swissprot
ID Q9LYP4
description BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana GN=BAG3 PE=1 SV=1
trembl
ID A0A067KP74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04669 PE=4 SV=1
Gene Ontology
ID GO:0051087
description bag family molecular chaperone regulator 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16304: 41933-43788 , PASA_asmbl_16305: 42572-42805
cDNA
(Sanger)
(ID:Location)		 005_B10.ab1: 41978-43511

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_172426_070 0.0 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
2 Hb_003163_010 0.0447706375 - - hypothetical protein POPTR_0012s02920g [Populus trichocarpa]
3 Hb_006831_090 0.0685300374 - - PREDICTED: uncharacterized protein LOC105642125 isoform X1 [Jatropha curcas]
4 Hb_001491_070 0.0694311708 - - PREDICTED: probable beta-1,3-galactosyltransferase 17 isoform X1 [Jatropha curcas]
5 Hb_002600_170 0.0822813847 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004032_280 0.0834516997 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]
7 Hb_008536_020 0.0893417795 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
8 Hb_000139_360 0.0893730414 - - PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas]
9 Hb_003911_050 0.0933601476 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
10 Hb_005018_010 0.0937192534 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
11 Hb_002001_030 0.0964254049 - - Plasma membrane ATPase 4 [Gossypium arboreum]
12 Hb_002374_180 0.0971676228 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
13 Hb_041139_010 0.0975414114 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
14 Hb_001735_040 0.0981241377 - - PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
15 Hb_000329_780 0.1033805619 - - hypothetical protein POPTR_0403s00200g [Populus trichocarpa]
16 Hb_002336_050 0.1034541111 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_166718_010 0.1035336313 - - heat-shock protein, putative [Ricinus communis]
18 Hb_002740_050 0.1054178496 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86-like [Populus euphratica]
19 Hb_027472_060 0.106691618 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
20 Hb_004204_060 0.1074712175 transcription factor TF Family: NAC NAC transcription factor 058, partial [Jatropha curcas]

Gene co-expression network

sample Hb_172426_070 Hb_172426_070 Hb_003163_010 Hb_003163_010 Hb_172426_070--Hb_003163_010 Hb_006831_090 Hb_006831_090 Hb_172426_070--Hb_006831_090 Hb_001491_070 Hb_001491_070 Hb_172426_070--Hb_001491_070 Hb_002600_170 Hb_002600_170 Hb_172426_070--Hb_002600_170 Hb_004032_280 Hb_004032_280 Hb_172426_070--Hb_004032_280 Hb_008536_020 Hb_008536_020 Hb_172426_070--Hb_008536_020 Hb_003163_010--Hb_006831_090 Hb_003911_050 Hb_003911_050 Hb_003163_010--Hb_003911_050 Hb_003163_010--Hb_002600_170 Hb_003163_010--Hb_008536_020 Hb_003163_010--Hb_001491_070 Hb_000329_780 Hb_000329_780 Hb_006831_090--Hb_000329_780 Hb_006831_090--Hb_002600_170 Hb_006831_090--Hb_004032_280 Hb_002374_180 Hb_002374_180 Hb_006831_090--Hb_002374_180 Hb_006831_090--Hb_008536_020 Hb_005018_010 Hb_005018_010 Hb_001491_070--Hb_005018_010 Hb_002001_030 Hb_002001_030 Hb_001491_070--Hb_002001_030 Hb_000424_130 Hb_000424_130 Hb_001491_070--Hb_000424_130 Hb_000139_360 Hb_000139_360 Hb_001491_070--Hb_000139_360 Hb_002600_170--Hb_002374_180 Hb_002600_170--Hb_008536_020 Hb_002600_170--Hb_000329_780 Hb_002600_170--Hb_004032_280 Hb_005532_030 Hb_005532_030 Hb_002600_170--Hb_005532_030 Hb_000599_150 Hb_000599_150 Hb_004032_280--Hb_000599_150 Hb_004032_280--Hb_000329_780 Hb_004032_280--Hb_008536_020 Hb_166718_010 Hb_166718_010 Hb_004032_280--Hb_166718_010 Hb_008536_020--Hb_000329_780 Hb_000520_040 Hb_000520_040 Hb_008536_020--Hb_000520_040 Hb_008536_020--Hb_002374_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.103511 0.496889 25.9944 29.1728 0.0388035 0.022482
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0947443 0 0 2.78347 42.1582

CAGE analysis