Hb_000265_030

Information

Type -
Description -
Location Contig265: 19053-23191
Sequence    

Annotation

kegg
ID pop:POPTR_0014s16970g
description POPTRDRAFT_573140; subtilisin-like protease family protein
nr
ID XP_012083905.1
description PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
swissprot
ID Q9ZSP5
description Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana GN=AIR3 PE=2 SV=1
trembl
ID A0A067LLC2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15019 PE=4 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27681: 19010-19502 , PASA_asmbl_27682: 21932-23100
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000265_030 0.0 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
2 Hb_002740_060 0.0826309427 - - PREDICTED: pectin acetylesterase 12 [Jatropha curcas]
3 Hb_032143_010 0.0874088079 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
4 Hb_005622_040 0.0920103044 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
5 Hb_002245_060 0.0973245448 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
6 Hb_010264_010 0.1025628372 - - PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Jatropha curcas]
7 Hb_005539_150 0.103668733 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Jatropha curcas]
8 Hb_001104_220 0.1041581068 - - PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
9 Hb_004896_030 0.1181583867 - - hypothetical protein VITISV_007475 [Vitis vinifera]
10 Hb_029386_010 0.1188370902 - - RALF-LIKE 27 family protein [Populus trichocarpa]
11 Hb_000670_070 0.1189939201 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
12 Hb_008253_050 0.1198849856 transcription factor TF Family: MYB hypothetical protein POPTR_0001s36220g [Populus trichocarpa]
13 Hb_007620_020 0.1225785554 - - PREDICTED: cationic amino acid transporter 7, chloroplastic-like isoform X1 [Jatropha curcas]
14 Hb_089124_010 0.1244382028 - - hypothetical protein POPTR_0018s09540g [Populus trichocarpa]
15 Hb_000608_190 0.1257583295 rubber biosynthesis Gene Name: Isopentenyl-diphosphate delta isomerase PREDICTED: isopentenyl-diphosphate Delta-isomerase I [Jatropha curcas]
16 Hb_000665_210 0.1277109978 - - PREDICTED: synaptotagmin-4 [Jatropha curcas]
17 Hb_001384_040 0.1278380482 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
18 Hb_003358_030 0.1290675048 - - ankyrin-kinase, putative [Ricinus communis]
19 Hb_000477_090 0.1301117995 - - PREDICTED: uncharacterized protein LOC105639302 [Jatropha curcas]
20 Hb_000654_020 0.1319753718 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]

Gene co-expression network

sample Hb_000265_030 Hb_000265_030 Hb_002740_060 Hb_002740_060 Hb_000265_030--Hb_002740_060 Hb_032143_010 Hb_032143_010 Hb_000265_030--Hb_032143_010 Hb_005622_040 Hb_005622_040 Hb_000265_030--Hb_005622_040 Hb_002245_060 Hb_002245_060 Hb_000265_030--Hb_002245_060 Hb_010264_010 Hb_010264_010 Hb_000265_030--Hb_010264_010 Hb_005539_150 Hb_005539_150 Hb_000265_030--Hb_005539_150 Hb_004896_030 Hb_004896_030 Hb_002740_060--Hb_004896_030 Hb_002740_060--Hb_005622_040 Hb_113379_010 Hb_113379_010 Hb_002740_060--Hb_113379_010 Hb_001384_040 Hb_001384_040 Hb_002740_060--Hb_001384_040 Hb_000627_110 Hb_000627_110 Hb_002740_060--Hb_000627_110 Hb_032143_010--Hb_010264_010 Hb_001104_220 Hb_001104_220 Hb_032143_010--Hb_001104_220 Hb_032143_010--Hb_005622_040 Hb_006142_050 Hb_006142_050 Hb_032143_010--Hb_006142_050 Hb_181463_020 Hb_181463_020 Hb_032143_010--Hb_181463_020 Hb_005622_040--Hb_001104_220 Hb_008253_050 Hb_008253_050 Hb_005622_040--Hb_008253_050 Hb_097783_030 Hb_097783_030 Hb_005622_040--Hb_097783_030 Hb_011501_020 Hb_011501_020 Hb_005622_040--Hb_011501_020 Hb_000122_230 Hb_000122_230 Hb_002245_060--Hb_000122_230 Hb_000654_020 Hb_000654_020 Hb_002245_060--Hb_000654_020 Hb_007620_020 Hb_007620_020 Hb_002245_060--Hb_007620_020 Hb_000670_070 Hb_000670_070 Hb_002245_060--Hb_000670_070 Hb_001408_200 Hb_001408_200 Hb_002245_060--Hb_001408_200 Hb_002245_060--Hb_005539_150 Hb_000017_140 Hb_000017_140 Hb_010264_010--Hb_000017_140 Hb_001269_660 Hb_001269_660 Hb_010264_010--Hb_001269_660 Hb_000665_210 Hb_000665_210 Hb_010264_010--Hb_000665_210 Hb_007101_140 Hb_007101_140 Hb_010264_010--Hb_007101_140 Hb_000477_090 Hb_000477_090 Hb_005539_150--Hb_000477_090 Hb_005539_150--Hb_000654_020 Hb_029386_010 Hb_029386_010 Hb_005539_150--Hb_029386_010 Hb_005539_150--Hb_008253_050 Hb_005539_150--Hb_000670_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.122217 1.34093 2.99086 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0294651 0.0231816 0 1.00792 5.49145

CAGE analysis