Hb_053422_010

Information

Type -
Description -
Location Contig53422: 455-1017
Sequence    

Annotation

kegg
ID tcc:TCM_021992
description hypothetical protein
nr
ID XP_012080836.1
description PREDICTED: uncharacterized protein LOC105641005 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K340
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16201 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_053422_010 0.0 - - PREDICTED: uncharacterized protein LOC105641005 [Jatropha curcas]
2 Hb_000879_170 0.2583100497 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
3 Hb_081930_010 0.2583722053 - - PREDICTED: cucumisin-like [Populus euphratica]
4 Hb_004108_180 0.2635365031 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
5 Hb_028487_060 0.2684160053 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
6 Hb_003768_020 0.2833587814 - - PREDICTED: uncharacterized protein LOC105644157 [Jatropha curcas]
7 Hb_001431_090 0.2866083421 transcription factor TF Family: DBP PREDICTED: probable protein phosphatase 2C 47, partial [Camelina sativa]
8 Hb_001227_070 0.2896900801 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
9 Hb_067118_010 0.2898587665 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
10 Hb_004093_030 0.2937117475 - - hypothetical protein RCOM_1406750 [Ricinus communis]
11 Hb_000815_220 0.2948375127 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004108_190 0.2949038575 - - PREDICTED: protein catecholamines up-like [Jatropha curcas]
13 Hb_011689_010 0.2996043007 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme 4 [Jatropha curcas]
14 Hb_029432_010 0.2996979131 - - UDP-glucosyltransferase, putative [Ricinus communis]
15 Hb_000497_250 0.3024718853 - - PREDICTED: potassium transporter 5 [Jatropha curcas]
16 Hb_000373_200 0.3032222538 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Populus euphratica]
17 Hb_004954_020 0.3035322145 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
18 Hb_005269_020 0.3051058302 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
19 Hb_000516_050 0.3073766855 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
20 Hb_001729_030 0.3122229587 - - hypothetical protein VITISV_044457 [Vitis vinifera]

Gene co-expression network

sample Hb_053422_010 Hb_053422_010 Hb_000879_170 Hb_000879_170 Hb_053422_010--Hb_000879_170 Hb_081930_010 Hb_081930_010 Hb_053422_010--Hb_081930_010 Hb_004108_180 Hb_004108_180 Hb_053422_010--Hb_004108_180 Hb_028487_060 Hb_028487_060 Hb_053422_010--Hb_028487_060 Hb_003768_020 Hb_003768_020 Hb_053422_010--Hb_003768_020 Hb_001431_090 Hb_001431_090 Hb_053422_010--Hb_001431_090 Hb_000853_180 Hb_000853_180 Hb_000879_170--Hb_000853_180 Hb_001227_070 Hb_001227_070 Hb_000879_170--Hb_001227_070 Hb_000879_170--Hb_028487_060 Hb_000856_400 Hb_000856_400 Hb_000879_170--Hb_000856_400 Hb_000012_330 Hb_000012_330 Hb_000879_170--Hb_000012_330 Hb_001357_050 Hb_001357_050 Hb_000879_170--Hb_001357_050 Hb_081930_010--Hb_000853_180 Hb_081930_010--Hb_000879_170 Hb_024468_030 Hb_024468_030 Hb_081930_010--Hb_024468_030 Hb_001140_050 Hb_001140_050 Hb_081930_010--Hb_001140_050 Hb_000003_500 Hb_000003_500 Hb_081930_010--Hb_000003_500 Hb_005269_020 Hb_005269_020 Hb_004108_180--Hb_005269_020 Hb_001642_020 Hb_001642_020 Hb_004108_180--Hb_001642_020 Hb_001031_140 Hb_001031_140 Hb_004108_180--Hb_001031_140 Hb_001426_020 Hb_001426_020 Hb_004108_180--Hb_001426_020 Hb_016734_100 Hb_016734_100 Hb_004108_180--Hb_016734_100 Hb_001141_180 Hb_001141_180 Hb_004108_180--Hb_001141_180 Hb_002267_060 Hb_002267_060 Hb_028487_060--Hb_002267_060 Hb_000321_170 Hb_000321_170 Hb_028487_060--Hb_000321_170 Hb_033720_030 Hb_033720_030 Hb_028487_060--Hb_033720_030 Hb_000261_070 Hb_000261_070 Hb_028487_060--Hb_000261_070 Hb_000342_040 Hb_000342_040 Hb_028487_060--Hb_000342_040 Hb_005496_040 Hb_005496_040 Hb_028487_060--Hb_005496_040 Hb_001729_030 Hb_001729_030 Hb_003768_020--Hb_001729_030 Hb_003581_230 Hb_003581_230 Hb_003768_020--Hb_003581_230 Hb_004220_010 Hb_004220_010 Hb_003768_020--Hb_004220_010 Hb_000622_050 Hb_000622_050 Hb_003768_020--Hb_000622_050 Hb_003768_020--Hb_000012_330 Hb_000976_400 Hb_000976_400 Hb_003768_020--Hb_000976_400 Hb_000497_250 Hb_000497_250 Hb_001431_090--Hb_000497_250 Hb_001514_030 Hb_001514_030 Hb_001431_090--Hb_001514_030 Hb_003894_170 Hb_003894_170 Hb_001431_090--Hb_003894_170 Hb_000120_930 Hb_000120_930 Hb_001431_090--Hb_000120_930 Hb_016333_010 Hb_016333_010 Hb_001431_090--Hb_016333_010 Hb_168918_010 Hb_168918_010 Hb_001431_090--Hb_168918_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.136465 0 0.17214 0.23213 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.185049

CAGE analysis