Hb_005269_020

Information

Type transcription factor
Description TF Family: bZIP
Location Contig5269: 5163-7310
Sequence    

Annotation

kegg
ID rcu:RCOM_0554250
description Transcription factor RF2a, putative
nr
ID XP_012079033.1
description PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
swissprot
ID Q9M2K4
description Basic leucine zipper 61 OS=Arabidopsis thaliana GN=BZIP61 PE=1 SV=1
trembl
ID A0A067K9X8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12229 PE=4 SV=1
Gene Ontology
ID GO:0003700
description basic leucine zipper 61-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005269_020 0.0 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
2 Hb_004108_180 0.0981571046 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
3 Hb_007120_120 0.1003086888 - - protein binding protein, putative [Ricinus communis]
4 Hb_000189_300 0.1049896038 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
5 Hb_000840_080 0.1069381356 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 9 [Jatropha curcas]
6 Hb_008021_060 0.1074641078 - - Squalene monooxygenase, putative [Ricinus communis]
7 Hb_009663_020 0.1075916044 - - -
8 Hb_016734_100 0.1089406161 - - -
9 Hb_001652_100 0.1096686933 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
10 Hb_001642_020 0.111538414 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 9 [Jatropha curcas]
11 Hb_012675_040 0.1154663681 - - PREDICTED: uncharacterized protein LOC105647773 isoform X1 [Jatropha curcas]
12 Hb_001031_140 0.116050895 - - PREDICTED: GDSL esterase/lipase At5g33370-like [Jatropha curcas]
13 Hb_006711_030 0.1164127108 - - PREDICTED: rho guanine nucleotide exchange factor 8-like [Jatropha curcas]
14 Hb_167188_020 0.1167168039 - - PREDICTED: uncharacterized protein At1g05835 [Jatropha curcas]
15 Hb_001728_070 0.1211749499 - - PREDICTED: probable glycosyltransferase At3g07620 [Jatropha curcas]
16 Hb_024071_030 0.121618995 - - hypothetical protein CICLE_v10025479mg [Citrus clementina]
17 Hb_000089_170 0.1218986688 - - PREDICTED: uncharacterized protein LOC105134595 [Populus euphratica]
18 Hb_012807_040 0.1226714582 - - hypothetical protein POPTR_0009s01390g [Populus trichocarpa]
19 Hb_001426_020 0.1244509903 - - hypothetical protein CICLE_v10033594mg, partial [Citrus clementina]
20 Hb_001141_180 0.124592765 - - non-specific lipid-transfer protein-like protein At2g13820 precursor [Jatropha curcas]

Gene co-expression network

sample Hb_005269_020 Hb_005269_020 Hb_004108_180 Hb_004108_180 Hb_005269_020--Hb_004108_180 Hb_007120_120 Hb_007120_120 Hb_005269_020--Hb_007120_120 Hb_000189_300 Hb_000189_300 Hb_005269_020--Hb_000189_300 Hb_000840_080 Hb_000840_080 Hb_005269_020--Hb_000840_080 Hb_008021_060 Hb_008021_060 Hb_005269_020--Hb_008021_060 Hb_009663_020 Hb_009663_020 Hb_005269_020--Hb_009663_020 Hb_001642_020 Hb_001642_020 Hb_004108_180--Hb_001642_020 Hb_001031_140 Hb_001031_140 Hb_004108_180--Hb_001031_140 Hb_001426_020 Hb_001426_020 Hb_004108_180--Hb_001426_020 Hb_016734_100 Hb_016734_100 Hb_004108_180--Hb_016734_100 Hb_001141_180 Hb_001141_180 Hb_004108_180--Hb_001141_180 Hb_007120_120--Hb_009663_020 Hb_024071_030 Hb_024071_030 Hb_007120_120--Hb_024071_030 Hb_007120_120--Hb_016734_100 Hb_001652_100 Hb_001652_100 Hb_007120_120--Hb_001652_100 Hb_163566_010 Hb_163566_010 Hb_007120_120--Hb_163566_010 Hb_007120_120--Hb_001642_020 Hb_000160_020 Hb_000160_020 Hb_000189_300--Hb_000160_020 Hb_012807_040 Hb_012807_040 Hb_000189_300--Hb_012807_040 Hb_088689_010 Hb_088689_010 Hb_000189_300--Hb_088689_010 Hb_008173_160 Hb_008173_160 Hb_000189_300--Hb_008173_160 Hb_001253_050 Hb_001253_050 Hb_000189_300--Hb_001253_050 Hb_002973_100 Hb_002973_100 Hb_000189_300--Hb_002973_100 Hb_007218_050 Hb_007218_050 Hb_000840_080--Hb_007218_050 Hb_006711_030 Hb_006711_030 Hb_000840_080--Hb_006711_030 Hb_002307_140 Hb_002307_140 Hb_000840_080--Hb_002307_140 Hb_167188_020 Hb_167188_020 Hb_000840_080--Hb_167188_020 Hb_000089_170 Hb_000089_170 Hb_000840_080--Hb_000089_170 Hb_000816_180 Hb_000816_180 Hb_000840_080--Hb_000816_180 Hb_008021_060--Hb_001652_100 Hb_007922_030 Hb_007922_030 Hb_008021_060--Hb_007922_030 Hb_000058_180 Hb_000058_180 Hb_008021_060--Hb_000058_180 Hb_008147_020 Hb_008147_020 Hb_008021_060--Hb_008147_020 Hb_132840_190 Hb_132840_190 Hb_008021_060--Hb_132840_190 Hb_008021_060--Hb_007120_120 Hb_009663_020--Hb_024071_030 Hb_009663_020--Hb_163566_010 Hb_009663_020--Hb_016734_100 Hb_009663_020--Hb_001652_100 Hb_000321_110 Hb_000321_110 Hb_009663_020--Hb_000321_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0465384 0 1.69597 1.08403 0.0233476 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.0266

CAGE analysis