Hb_001140_050

Information

Type -
Description -
Location Contig1140: 112917-116852
Sequence    

Annotation

kegg
ID rcu:RCOM_1496650
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:2.7.11.25 3.1.3.16 1.3.1.74)
nr
ID XP_012090287.1
description PREDICTED: leucine-rich repeat receptor protein kinase EMS1 [Jatropha curcas]
swissprot
ID Q9LYN8
description Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana GN=EMS1 PE=1 SV=1
trembl
ID A0A067JEQ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26138 PE=4 SV=1
Gene Ontology
ID GO:0004672
description leucine-rich repeat receptor protein kinase exs

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04173: 114885-115077
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001140_050 0.0 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1 [Jatropha curcas]
2 Hb_008195_060 0.1349109547 transcription factor TF Family: NAC NAC transcription factor 018 [Jatropha curcas]
3 Hb_001031_140 0.1389664142 - - PREDICTED: GDSL esterase/lipase At5g33370-like [Jatropha curcas]
4 Hb_143629_180 0.1402071274 transcription factor TF Family: MYB myb family transcription factor family protein [Populus trichocarpa]
5 Hb_001141_180 0.1403525508 - - non-specific lipid-transfer protein-like protein At2g13820 precursor [Jatropha curcas]
6 Hb_001728_070 0.1421650808 - - PREDICTED: probable glycosyltransferase At3g07620 [Jatropha curcas]
7 Hb_036437_010 0.1423101958 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
8 Hb_016734_100 0.1436187545 - - -
9 Hb_004724_090 0.1438599986 - - PREDICTED: uncharacterized protein LOC105638638 [Jatropha curcas]
10 Hb_001642_020 0.1448251368 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 9 [Jatropha curcas]
11 Hb_000777_080 0.1455724243 - - hypothetical protein POPTR_0015s15410g [Populus trichocarpa]
12 Hb_001206_110 0.1456744571 - - PREDICTED: GDSL esterase/lipase At5g45910 [Jatropha curcas]
13 Hb_004735_030 0.1474177456 - - PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
14 Hb_001426_020 0.1480586632 - - hypothetical protein CICLE_v10033594mg, partial [Citrus clementina]
15 Hb_000487_080 0.1487877138 - - PREDICTED: probable potassium transporter 13 [Jatropha curcas]
16 Hb_002043_020 0.1497662208 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH87 [Jatropha curcas]
17 Hb_004096_230 0.1499054179 - - PREDICTED: uncharacterized protein LOC105638704 isoform X1 [Jatropha curcas]
18 Hb_088689_010 0.1503823766 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
19 Hb_008173_160 0.1504244215 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
20 Hb_007894_200 0.150741181 - - ubiquitin-conjugating enzyme variant, putative [Ricinus communis]

Gene co-expression network

sample Hb_001140_050 Hb_001140_050 Hb_008195_060 Hb_008195_060 Hb_001140_050--Hb_008195_060 Hb_001031_140 Hb_001031_140 Hb_001140_050--Hb_001031_140 Hb_143629_180 Hb_143629_180 Hb_001140_050--Hb_143629_180 Hb_001141_180 Hb_001141_180 Hb_001140_050--Hb_001141_180 Hb_001728_070 Hb_001728_070 Hb_001140_050--Hb_001728_070 Hb_036437_010 Hb_036437_010 Hb_001140_050--Hb_036437_010 Hb_007044_240 Hb_007044_240 Hb_008195_060--Hb_007044_240 Hb_000556_060 Hb_000556_060 Hb_008195_060--Hb_000556_060 Hb_009847_010 Hb_009847_010 Hb_008195_060--Hb_009847_010 Hb_024071_030 Hb_024071_030 Hb_008195_060--Hb_024071_030 Hb_000847_090 Hb_000847_090 Hb_008195_060--Hb_000847_090 Hb_001031_140--Hb_001141_180 Hb_001642_020 Hb_001642_020 Hb_001031_140--Hb_001642_020 Hb_001031_140--Hb_001728_070 Hb_016734_100 Hb_016734_100 Hb_001031_140--Hb_016734_100 Hb_001206_110 Hb_001206_110 Hb_001031_140--Hb_001206_110 Hb_002043_020 Hb_002043_020 Hb_001031_140--Hb_002043_020 Hb_002078_330 Hb_002078_330 Hb_143629_180--Hb_002078_330 Hb_143629_180--Hb_002043_020 Hb_000538_090 Hb_000538_090 Hb_143629_180--Hb_000538_090 Hb_017434_040 Hb_017434_040 Hb_143629_180--Hb_017434_040 Hb_002704_060 Hb_002704_060 Hb_143629_180--Hb_002704_060 Hb_008147_020 Hb_008147_020 Hb_143629_180--Hb_008147_020 Hb_004735_030 Hb_004735_030 Hb_001141_180--Hb_004735_030 Hb_001141_180--Hb_001728_070 Hb_000777_080 Hb_000777_080 Hb_001141_180--Hb_000777_080 Hb_001141_180--Hb_001206_110 Hb_013394_070 Hb_013394_070 Hb_001141_180--Hb_013394_070 Hb_001728_070--Hb_000777_080 Hb_088689_010 Hb_088689_010 Hb_001728_070--Hb_088689_010 Hb_008173_160 Hb_008173_160 Hb_001728_070--Hb_008173_160 Hb_001728_070--Hb_001206_110 Hb_007894_200 Hb_007894_200 Hb_001728_070--Hb_007894_200 Hb_001863_530 Hb_001863_530 Hb_036437_010--Hb_001863_530 Hb_009692_050 Hb_009692_050 Hb_036437_010--Hb_009692_050 Hb_147976_010 Hb_147976_010 Hb_036437_010--Hb_147976_010 Hb_003598_070 Hb_003598_070 Hb_036437_010--Hb_003598_070 Hb_003750_110 Hb_003750_110 Hb_036437_010--Hb_003750_110 Hb_002284_290 Hb_002284_290 Hb_036437_010--Hb_002284_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.233983 0.145048 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0217651 0 0 0 0.183516

CAGE analysis