Hb_004735_030

Information

Type -
Description -
Location Contig4735: 54142-57202
Sequence    

Annotation

kegg
ID rcu:RCOM_0220560
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_012078717.1
description PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
swissprot
ID O48786
description Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2 SV=1
trembl
ID A0A067KBH8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13283 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 734a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44451: 54548-55131 , PASA_asmbl_44452: 57191-57374
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004735_030 0.0 - - PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
2 Hb_000777_080 0.0251340656 - - hypothetical protein POPTR_0015s15410g [Populus trichocarpa]
3 Hb_001141_180 0.0260849436 - - non-specific lipid-transfer protein-like protein At2g13820 precursor [Jatropha curcas]
4 Hb_013394_070 0.0327998103 - - hypothetical protein POPTR_0013s12090g [Populus trichocarpa]
5 Hb_001728_070 0.0336790239 - - PREDICTED: probable glycosyltransferase At3g07620 [Jatropha curcas]
6 Hb_004724_090 0.0415417606 - - PREDICTED: uncharacterized protein LOC105638638 [Jatropha curcas]
7 Hb_001206_110 0.0429492516 - - PREDICTED: GDSL esterase/lipase At5g45910 [Jatropha curcas]
8 Hb_004993_020 0.0461801632 - - PREDICTED: putative ribonuclease H protein At1g65750 [Beta vulgaris subsp. vulgaris]
9 Hb_007894_200 0.0472822245 - - ubiquitin-conjugating enzyme variant, putative [Ricinus communis]
10 Hb_000557_070 0.0478643878 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
11 Hb_001519_140 0.0488302383 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Vitis vinifera]
12 Hb_006117_030 0.0498538068 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001031_140 0.051056054 - - PREDICTED: GDSL esterase/lipase At5g33370-like [Jatropha curcas]
14 Hb_002973_100 0.0513481752 transcription factor TF Family: GNAT PREDICTED: probable N-acetyltransferase HLS1 [Populus euphratica]
15 Hb_008173_160 0.0516964545 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
16 Hb_088689_010 0.0517054259 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
17 Hb_002965_170 0.057013245 transcription factor TF Family: MYB PREDICTED: myb-related protein P [Jatropha curcas]
18 Hb_002043_020 0.0609176543 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH87 [Jatropha curcas]
19 Hb_068580_010 0.0670580361 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 [Populus euphratica]
20 Hb_012807_040 0.0678971221 - - hypothetical protein POPTR_0009s01390g [Populus trichocarpa]

Gene co-expression network

sample Hb_004735_030 Hb_004735_030 Hb_000777_080 Hb_000777_080 Hb_004735_030--Hb_000777_080 Hb_001141_180 Hb_001141_180 Hb_004735_030--Hb_001141_180 Hb_013394_070 Hb_013394_070 Hb_004735_030--Hb_013394_070 Hb_001728_070 Hb_001728_070 Hb_004735_030--Hb_001728_070 Hb_004724_090 Hb_004724_090 Hb_004735_030--Hb_004724_090 Hb_001206_110 Hb_001206_110 Hb_004735_030--Hb_001206_110 Hb_000777_080--Hb_001728_070 Hb_000777_080--Hb_013394_070 Hb_007894_200 Hb_007894_200 Hb_000777_080--Hb_007894_200 Hb_088689_010 Hb_088689_010 Hb_000777_080--Hb_088689_010 Hb_008173_160 Hb_008173_160 Hb_000777_080--Hb_008173_160 Hb_001031_140 Hb_001031_140 Hb_001141_180--Hb_001031_140 Hb_001141_180--Hb_001728_070 Hb_001141_180--Hb_000777_080 Hb_001141_180--Hb_001206_110 Hb_001141_180--Hb_013394_070 Hb_002973_100 Hb_002973_100 Hb_013394_070--Hb_002973_100 Hb_013394_070--Hb_007894_200 Hb_013394_070--Hb_008173_160 Hb_013394_070--Hb_088689_010 Hb_013394_070--Hb_001728_070 Hb_001728_070--Hb_088689_010 Hb_001728_070--Hb_008173_160 Hb_001728_070--Hb_001206_110 Hb_001728_070--Hb_007894_200 Hb_000557_070 Hb_000557_070 Hb_004724_090--Hb_000557_070 Hb_006117_030 Hb_006117_030 Hb_004724_090--Hb_006117_030 Hb_004993_020 Hb_004993_020 Hb_004724_090--Hb_004993_020 Hb_000731_150 Hb_000731_150 Hb_004724_090--Hb_000731_150 Hb_004724_090--Hb_001206_110 Hb_001206_110--Hb_000777_080 Hb_001206_110--Hb_088689_010 Hb_001206_110--Hb_008173_160 Hb_001206_110--Hb_007894_200 Hb_001206_110--Hb_002973_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.266655 0.136565 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.242476

CAGE analysis