Hb_008195_060

Information

Type transcription factor
Description TF Family: NAC
Location Contig8195: 74990-76776
Sequence    

Annotation

kegg
ID rcu:RCOM_0195410
description NAC domain-containing protein, putative
nr
ID AGL39674.1
description NAC transcription factor 018 [Jatropha curcas]
swissprot
ID Q9FWX2
description NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2
trembl
ID R4NFS9
description NAC transcription factor 018 OS=Jatropha curcas GN=JCGZ_20782 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nac domain-containing protein 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008195_060 0.0 transcription factor TF Family: NAC NAC transcription factor 018 [Jatropha curcas]
2 Hb_007044_240 0.1057715775 - - PREDICTED: uncharacterized protein LOC105638704 isoform X1 [Jatropha curcas]
3 Hb_000556_060 0.1160384508 - - hypothetical protein OsJ_28181 [Oryza sativa Japonica Group]
4 Hb_009847_010 0.1236093157 - - PREDICTED: uncharacterized protein LOC105641219 [Jatropha curcas]
5 Hb_024071_030 0.1319529614 - - hypothetical protein CICLE_v10025479mg [Citrus clementina]
6 Hb_000847_090 0.13393608 - - PREDICTED: uncharacterized protein LOC105644263 isoform X1 [Jatropha curcas]
7 Hb_001140_050 0.1349109547 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1 [Jatropha curcas]
8 Hb_009663_020 0.1364459431 - - -
9 Hb_007120_120 0.1384706955 - - protein binding protein, putative [Ricinus communis]
10 Hb_132840_190 0.1410770518 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
11 Hb_031022_030 0.141785654 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7-like [Jatropha curcas]
12 Hb_006711_030 0.1428513265 - - PREDICTED: rho guanine nucleotide exchange factor 8-like [Jatropha curcas]
13 Hb_002307_140 0.1437461104 transcription factor TF Family: AUX/IAA aux/IAA family protein [Populus trichocarpa]
14 Hb_007221_020 0.1442166627 - - FAD-binding domain-containing family protein [Populus trichocarpa]
15 Hb_002411_090 0.1447576484 - - PREDICTED: putative RING-H2 finger protein ATL69 [Jatropha curcas]
16 Hb_011004_070 0.1476912701 - - hypothetical protein RCOM_1494490 [Ricinus communis]
17 Hb_000676_360 0.1479566249 - - hypothetical protein POPTR_0007s13690g [Populus trichocarpa]
18 Hb_000003_500 0.1485917266 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12-like [Jatropha curcas]
19 Hb_000375_220 0.1492070633 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
20 Hb_001652_100 0.1495592755 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]

Gene co-expression network

sample Hb_008195_060 Hb_008195_060 Hb_007044_240 Hb_007044_240 Hb_008195_060--Hb_007044_240 Hb_000556_060 Hb_000556_060 Hb_008195_060--Hb_000556_060 Hb_009847_010 Hb_009847_010 Hb_008195_060--Hb_009847_010 Hb_024071_030 Hb_024071_030 Hb_008195_060--Hb_024071_030 Hb_000847_090 Hb_000847_090 Hb_008195_060--Hb_000847_090 Hb_001140_050 Hb_001140_050 Hb_008195_060--Hb_001140_050 Hb_002307_140 Hb_002307_140 Hb_007044_240--Hb_002307_140 Hb_007044_240--Hb_000556_060 Hb_007218_050 Hb_007218_050 Hb_007044_240--Hb_007218_050 Hb_006711_030 Hb_006711_030 Hb_007044_240--Hb_006711_030 Hb_007044_240--Hb_009847_010 Hb_180535_010 Hb_180535_010 Hb_007044_240--Hb_180535_010 Hb_000556_060--Hb_009847_010 Hb_000556_060--Hb_000847_090 Hb_000556_060--Hb_024071_030 Hb_009663_020 Hb_009663_020 Hb_000556_060--Hb_009663_020 Hb_007120_120 Hb_007120_120 Hb_000556_060--Hb_007120_120 Hb_009847_010--Hb_000847_090 Hb_009847_010--Hb_024071_030 Hb_000127_240 Hb_000127_240 Hb_009847_010--Hb_000127_240 Hb_000375_220 Hb_000375_220 Hb_009847_010--Hb_000375_220 Hb_024071_030--Hb_009663_020 Hb_024071_030--Hb_007120_120 Hb_163566_010 Hb_163566_010 Hb_024071_030--Hb_163566_010 Hb_000321_110 Hb_000321_110 Hb_024071_030--Hb_000321_110 Hb_000847_090--Hb_000375_220 Hb_000847_090--Hb_007044_240 Hb_000847_090--Hb_002307_140 Hb_000847_090--Hb_006711_030 Hb_001031_140 Hb_001031_140 Hb_001140_050--Hb_001031_140 Hb_143629_180 Hb_143629_180 Hb_001140_050--Hb_143629_180 Hb_001141_180 Hb_001141_180 Hb_001140_050--Hb_001141_180 Hb_001728_070 Hb_001728_070 Hb_001140_050--Hb_001728_070 Hb_036437_010 Hb_036437_010 Hb_001140_050--Hb_036437_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.676509 0.560711 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0468809 0 0 0 0.303048

CAGE analysis