Hb_000853_180

Information

Type -
Description -
Location Contig853: 129687-135536
Sequence    

Annotation

kegg
ID rcu:RCOM_1179790
description kinesin heavy chain, putative
nr
ID XP_002523135.1
description kinesin heavy chain, putative [Ricinus communis]
swissprot
ID O81635
description Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
trembl
ID B9SAW6
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1179790 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin heavy

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60478: 129912-131277 , PASA_asmbl_60479: 135405-135540
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000853_180 0.0 - - kinesin heavy chain, putative [Ricinus communis]
2 Hb_000879_170 0.1265915053 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
3 Hb_000856_400 0.1422963171 - - PREDICTED: protein IQ-DOMAIN 31-like [Jatropha curcas]
4 Hb_015941_010 0.1566418328 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
5 Hb_005144_120 0.1672335943 - - PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
6 Hb_000291_290 0.1738736954 - - conserved hypothetical protein [Ricinus communis]
7 Hb_017439_010 0.1777538376 - - putative actin-97 protein [Linum usitatissimum]
8 Hb_000932_050 0.1803840309 - - annexin [Manihot esculenta]
9 Hb_002498_030 0.1812078344 - - conserved hypothetical protein [Ricinus communis]
10 Hb_143004_020 0.1812636194 - - PREDICTED: phosphopantothenate--cysteine ligase 2-like [Jatropha curcas]
11 Hb_000328_010 0.1831353397 - - PREDICTED: QWRF motif-containing protein 8-like [Jatropha curcas]
12 Hb_001195_130 0.1837921046 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004117_090 0.1889272483 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 70 [Jatropha curcas]
14 Hb_000300_480 0.1911571639 - - hypothetical protein RCOM_1321910 [Ricinus communis]
15 Hb_009222_110 0.1926914171 - - PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
16 Hb_001227_070 0.1940465488 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
17 Hb_028487_060 0.1945285626 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
18 Hb_001544_050 0.1950679074 - - PREDICTED: U-box domain-containing protein 11-like [Jatropha curcas]
19 Hb_000191_140 0.1966963026 - - PREDICTED: growth-regulating factor 1-like isoform X2 [Jatropha curcas]
20 Hb_000388_080 0.1967040318 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]

Gene co-expression network

sample Hb_000853_180 Hb_000853_180 Hb_000879_170 Hb_000879_170 Hb_000853_180--Hb_000879_170 Hb_000856_400 Hb_000856_400 Hb_000853_180--Hb_000856_400 Hb_015941_010 Hb_015941_010 Hb_000853_180--Hb_015941_010 Hb_005144_120 Hb_005144_120 Hb_000853_180--Hb_005144_120 Hb_000291_290 Hb_000291_290 Hb_000853_180--Hb_000291_290 Hb_017439_010 Hb_017439_010 Hb_000853_180--Hb_017439_010 Hb_001227_070 Hb_001227_070 Hb_000879_170--Hb_001227_070 Hb_028487_060 Hb_028487_060 Hb_000879_170--Hb_028487_060 Hb_000879_170--Hb_000856_400 Hb_000012_330 Hb_000012_330 Hb_000879_170--Hb_000012_330 Hb_001357_050 Hb_001357_050 Hb_000879_170--Hb_001357_050 Hb_000932_050 Hb_000932_050 Hb_000856_400--Hb_000932_050 Hb_001195_130 Hb_001195_130 Hb_000856_400--Hb_001195_130 Hb_001450_040 Hb_001450_040 Hb_000856_400--Hb_001450_040 Hb_000193_210 Hb_000193_210 Hb_000856_400--Hb_000193_210 Hb_001579_300 Hb_001579_300 Hb_000856_400--Hb_001579_300 Hb_143629_120 Hb_143629_120 Hb_015941_010--Hb_143629_120 Hb_001775_080 Hb_001775_080 Hb_015941_010--Hb_001775_080 Hb_000749_290 Hb_000749_290 Hb_015941_010--Hb_000749_290 Hb_002078_390 Hb_002078_390 Hb_015941_010--Hb_002078_390 Hb_005784_010 Hb_005784_010 Hb_015941_010--Hb_005784_010 Hb_001951_080 Hb_001951_080 Hb_015941_010--Hb_001951_080 Hb_000086_210 Hb_000086_210 Hb_005144_120--Hb_000086_210 Hb_011004_050 Hb_011004_050 Hb_005144_120--Hb_011004_050 Hb_008179_030 Hb_008179_030 Hb_005144_120--Hb_008179_030 Hb_009222_110 Hb_009222_110 Hb_005144_120--Hb_009222_110 Hb_000328_010 Hb_000328_010 Hb_005144_120--Hb_000328_010 Hb_005563_010 Hb_005563_010 Hb_005144_120--Hb_005563_010 Hb_001864_080 Hb_001864_080 Hb_000291_290--Hb_001864_080 Hb_000256_080 Hb_000256_080 Hb_000291_290--Hb_000256_080 Hb_002182_020 Hb_002182_020 Hb_000291_290--Hb_002182_020 Hb_000291_290--Hb_005144_120 Hb_000390_190 Hb_000390_190 Hb_000291_290--Hb_000390_190 Hb_006925_050 Hb_006925_050 Hb_000291_290--Hb_006925_050 Hb_002498_030 Hb_002498_030 Hb_017439_010--Hb_002498_030 Hb_001401_040 Hb_001401_040 Hb_017439_010--Hb_001401_040 Hb_003055_090 Hb_003055_090 Hb_017439_010--Hb_003055_090 Hb_001268_160 Hb_001268_160 Hb_017439_010--Hb_001268_160 Hb_010889_010 Hb_010889_010 Hb_017439_010--Hb_010889_010 Hb_017439_010--Hb_000328_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.40067 1.17621 12.4888 18.0382 0.4785 0.355477
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.02803 1.01441 0.22024 0.242708 10.463

CAGE analysis