Hb_001775_080

Information

Type -
Description -
Location Contig1775: 77559-84836
Sequence    

Annotation

kegg
ID rcu:RCOM_1180710
description fructose-bisphosphate aldolase, putative (EC:4.1.2.13)
nr
ID XP_002533605.1
description fructose-bisphosphate aldolase, putative [Ricinus communis]
swissprot
ID P17784
description Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2
trembl
ID B9T5T6
description Fructose-bisphosphate aldolase OS=Ricinus communis GN=RCOM_1180710 PE=3 SV=1
Gene Ontology
ID GO:0004332
description fructose-bisphosphate aldolase cytoplasmic isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17036: 78375-78586 , PASA_asmbl_17038: 84636-84928
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001775_080 0.0 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
2 Hb_006569_080 0.1205937638 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_024559 [Vitis vinifera]
3 Hb_015941_010 0.1255124348 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
4 Hb_019516_060 0.1379206902 - - PREDICTED: uncharacterized protein LOC105634259 [Jatropha curcas]
5 Hb_000069_560 0.1379753707 - - hypothetical protein POPTR_0002s16980g [Populus trichocarpa]
6 Hb_000922_400 0.142353161 - - PREDICTED: uncharacterized protein LOC105640363 [Jatropha curcas]
7 Hb_005305_040 0.1449807087 transcription factor TF Family: C3H transcription factor, putative [Ricinus communis]
8 Hb_000030_130 0.1451103363 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
9 Hb_084147_010 0.1454138421 - - amino acid transporter, putative [Ricinus communis]
10 Hb_000011_280 0.1454629831 - - pectinesterase family protein [Populus trichocarpa]
11 Hb_005542_070 0.1456141357 - - hypothetical protein ZEAMMB73_851878 [Zea mays]
12 Hb_009785_030 0.1473851891 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
13 Hb_000230_410 0.1474638454 - - PREDICTED: uncharacterized protein LOC105631891 [Jatropha curcas]
14 Hb_000749_290 0.1486553412 - - PREDICTED: uncharacterized protein LOC105644242 [Jatropha curcas]
15 Hb_000003_580 0.1494641362 - - conserved hypothetical protein [Ricinus communis]
16 Hb_006586_040 0.1501288873 - - hypothetical protein POPTR_0011s11750g [Populus trichocarpa]
17 Hb_000680_060 0.1507834598 - - hypothetical protein POPTR_0001s20790g [Populus trichocarpa]
18 Hb_064546_010 0.1525283403 - - PREDICTED: peroxidase 3 [Jatropha curcas]
19 Hb_000261_070 0.1532382469 - - PREDICTED: F-box/kelch-repeat protein At3g06240-like [Jatropha curcas]
20 Hb_003086_030 0.1536412761 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]

Gene co-expression network

sample Hb_001775_080 Hb_001775_080 Hb_006569_080 Hb_006569_080 Hb_001775_080--Hb_006569_080 Hb_015941_010 Hb_015941_010 Hb_001775_080--Hb_015941_010 Hb_019516_060 Hb_019516_060 Hb_001775_080--Hb_019516_060 Hb_000069_560 Hb_000069_560 Hb_001775_080--Hb_000069_560 Hb_000922_400 Hb_000922_400 Hb_001775_080--Hb_000922_400 Hb_005305_040 Hb_005305_040 Hb_001775_080--Hb_005305_040 Hb_002876_340 Hb_002876_340 Hb_006569_080--Hb_002876_340 Hb_006750_010 Hb_006750_010 Hb_006569_080--Hb_006750_010 Hb_001699_080 Hb_001699_080 Hb_006569_080--Hb_001699_080 Hb_006569_080--Hb_019516_060 Hb_000820_110 Hb_000820_110 Hb_006569_080--Hb_000820_110 Hb_143629_120 Hb_143629_120 Hb_015941_010--Hb_143629_120 Hb_000749_290 Hb_000749_290 Hb_015941_010--Hb_000749_290 Hb_002078_390 Hb_002078_390 Hb_015941_010--Hb_002078_390 Hb_005784_010 Hb_005784_010 Hb_015941_010--Hb_005784_010 Hb_001951_080 Hb_001951_080 Hb_015941_010--Hb_001951_080 Hb_000246_130 Hb_000246_130 Hb_019516_060--Hb_000246_130 Hb_000030_130 Hb_000030_130 Hb_019516_060--Hb_000030_130 Hb_019516_060--Hb_000820_110 Hb_003462_040 Hb_003462_040 Hb_019516_060--Hb_003462_040 Hb_012395_110 Hb_012395_110 Hb_019516_060--Hb_012395_110 Hb_019516_060--Hb_006750_010 Hb_000260_110 Hb_000260_110 Hb_000069_560--Hb_000260_110 Hb_000069_560--Hb_000030_130 Hb_001102_160 Hb_001102_160 Hb_000069_560--Hb_001102_160 Hb_000069_560--Hb_000922_400 Hb_000069_560--Hb_019516_060 Hb_006002_050 Hb_006002_050 Hb_000922_400--Hb_006002_050 Hb_000345_550 Hb_000345_550 Hb_000922_400--Hb_000345_550 Hb_033720_030 Hb_033720_030 Hb_000922_400--Hb_033720_030 Hb_000922_400--Hb_005784_010 Hb_012055_070 Hb_012055_070 Hb_000922_400--Hb_012055_070 Hb_002783_280 Hb_002783_280 Hb_000922_400--Hb_002783_280 Hb_000161_140 Hb_000161_140 Hb_005305_040--Hb_000161_140 Hb_001936_120 Hb_001936_120 Hb_005305_040--Hb_001936_120 Hb_000928_200 Hb_000928_200 Hb_005305_040--Hb_000928_200 Hb_002759_030 Hb_002759_030 Hb_005305_040--Hb_002759_030 Hb_000457_120 Hb_000457_120 Hb_005305_040--Hb_000457_120 Hb_163950_050 Hb_163950_050 Hb_005305_040--Hb_163950_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0435983 0.142672 0.327127 0.928823 0.0102966 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0233721 0.0367792 0 0.0365922 0.388272

CAGE analysis