Hb_001102_120

Information

Type -
Description -
Location Contig1102: 118631-119310
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001102_120 0.0 - - -
2 Hb_000905_050 0.1442410024 - - Zeamatin precursor, putative [Ricinus communis]
3 Hb_028872_020 0.2118593901 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
4 Hb_003183_010 0.2256060575 - - PREDICTED: uncharacterized protein LOC105785048, partial [Gossypium raimondii]
5 Hb_003186_050 0.2725074381 - - -
6 Hb_167457_010 0.2729748504 - - hypothetical protein glysoja_045622, partial [Glycine soja]
7 Hb_011476_010 0.2762415848 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
8 Hb_129046_010 0.2764827367 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
9 Hb_001629_040 0.2881954452 - - hypothetical protein POPTR_0001s41630g [Populus trichocarpa]
10 Hb_000009_010 0.2884186249 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
11 Hb_000946_130 0.2900803641 - - PREDICTED: uncharacterized protein LOC104602430 [Nelumbo nucifera]
12 Hb_001221_350 0.29450993 - - conserved hypothetical protein [Ricinus communis]
13 Hb_129420_010 0.2954357689 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
14 Hb_004274_010 0.2960764233 - - PREDICTED: uncharacterized protein LOC104451199 [Eucalyptus grandis]
15 Hb_001452_150 0.3012563311 - - PREDICTED: uncharacterized protein LOC104879858 [Vitis vinifera]
16 Hb_128193_010 0.3024760711 - - PREDICTED: uncharacterized protein LOC103699534, partial [Phoenix dactylifera]
17 Hb_003427_040 0.3031894552 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
18 Hb_005843_060 0.305083085 - - PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X3 [Nelumbo nucifera]
19 Hb_009826_010 0.305221728 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_006810_020 0.3087757774 - - PREDICTED: NADPH:quinone oxidoreductase-like [Jatropha curcas]

Gene co-expression network

sample Hb_001102_120 Hb_001102_120 Hb_000905_050 Hb_000905_050 Hb_001102_120--Hb_000905_050 Hb_028872_020 Hb_028872_020 Hb_001102_120--Hb_028872_020 Hb_003183_010 Hb_003183_010 Hb_001102_120--Hb_003183_010 Hb_003186_050 Hb_003186_050 Hb_001102_120--Hb_003186_050 Hb_167457_010 Hb_167457_010 Hb_001102_120--Hb_167457_010 Hb_011476_010 Hb_011476_010 Hb_001102_120--Hb_011476_010 Hb_116701_030 Hb_116701_030 Hb_000905_050--Hb_116701_030 Hb_000905_050--Hb_028872_020 Hb_129420_010 Hb_129420_010 Hb_000905_050--Hb_129420_010 Hb_000905_050--Hb_003183_010 Hb_000914_010 Hb_000914_010 Hb_000905_050--Hb_000914_010 Hb_001221_350 Hb_001221_350 Hb_028872_020--Hb_001221_350 Hb_003462_170 Hb_003462_170 Hb_028872_020--Hb_003462_170 Hb_028872_020--Hb_003183_010 Hb_094484_010 Hb_094484_010 Hb_028872_020--Hb_094484_010 Hb_062192_050 Hb_062192_050 Hb_028872_020--Hb_062192_050 Hb_003427_040 Hb_003427_040 Hb_028872_020--Hb_003427_040 Hb_129046_010 Hb_129046_010 Hb_003183_010--Hb_129046_010 Hb_003183_010--Hb_001221_350 Hb_002631_270 Hb_002631_270 Hb_003183_010--Hb_002631_270 Hb_002447_100 Hb_002447_100 Hb_003183_010--Hb_002447_100 Hb_155423_010 Hb_155423_010 Hb_003183_010--Hb_155423_010 Hb_003186_050--Hb_167457_010 Hb_003186_050--Hb_011476_010 Hb_004274_010 Hb_004274_010 Hb_003186_050--Hb_004274_010 Hb_001452_150 Hb_001452_150 Hb_003186_050--Hb_001452_150 Hb_000946_130 Hb_000946_130 Hb_003186_050--Hb_000946_130 Hb_003186_050--Hb_003427_040 Hb_167457_010--Hb_011476_010 Hb_167457_010--Hb_004274_010 Hb_167457_010--Hb_001452_150 Hb_005843_060 Hb_005843_060 Hb_167457_010--Hb_005843_060 Hb_167457_010--Hb_000946_130 Hb_011476_010--Hb_004274_010 Hb_011476_010--Hb_001452_150 Hb_011476_010--Hb_000914_010 Hb_011476_010--Hb_003427_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0451243 0 0 0.050227 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0677046 0.158839

CAGE analysis