Hb_167457_010

Information

Type -
Description -
Location Contig167457: 236-3357
Sequence    

Annotation

kegg
ID tcc:TCM_018339
description hypothetical protein
nr
ID KHN15378.1
description hypothetical protein glysoja_045622, partial [Glycine soja]
swissprot
ID -
description -
trembl
ID A0A0B2Q5N7
description Uncharacterized protein (Fragment) OS=Glycine soja GN=glysoja_045622 PE=4 SV=1
Gene Ontology
ID GO:0003676
description cysteine-rich rlk (receptor-like protein kinase) 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167457_010 0.0 - - hypothetical protein glysoja_045622, partial [Glycine soja]
2 Hb_003186_050 0.0104763989 - - -
3 Hb_011476_010 0.0636853585 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
4 Hb_004274_010 0.1185446769 - - PREDICTED: uncharacterized protein LOC104451199 [Eucalyptus grandis]
5 Hb_001452_150 0.1285780084 - - PREDICTED: uncharacterized protein LOC104879858 [Vitis vinifera]
6 Hb_005843_060 0.130600575 - - PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X3 [Nelumbo nucifera]
7 Hb_000946_130 0.1306225035 - - PREDICTED: uncharacterized protein LOC104602430 [Nelumbo nucifera]
8 Hb_003427_040 0.1309981317 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
9 Hb_009826_010 0.1356482005 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_125116_020 0.1603177157 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X5 [Populus euphratica]
11 Hb_016835_020 0.163504369 - - unnamed protein product [Coffea canephora]
12 Hb_000914_010 0.1690735218 - - hypothetical protein POPTR_0025s00760g [Populus trichocarpa]
13 Hb_051410_010 0.1724694521 - - PREDICTED: uncharacterized protein LOC103401813 [Malus domestica]
14 Hb_002542_050 0.1742998099 - - -
15 Hb_165396_010 0.1754102581 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
16 Hb_003450_010 0.1834868532 - - -
17 Hb_094484_010 0.1837391632 - - kinase, putative [Ricinus communis]
18 Hb_010964_030 0.1981881131 - - PREDICTED: uncharacterized protein LOC105647958 [Jatropha curcas]
19 Hb_000169_100 0.2015313422 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
20 Hb_151870_010 0.2026897926 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_167457_010 Hb_167457_010 Hb_003186_050 Hb_003186_050 Hb_167457_010--Hb_003186_050 Hb_011476_010 Hb_011476_010 Hb_167457_010--Hb_011476_010 Hb_004274_010 Hb_004274_010 Hb_167457_010--Hb_004274_010 Hb_001452_150 Hb_001452_150 Hb_167457_010--Hb_001452_150 Hb_005843_060 Hb_005843_060 Hb_167457_010--Hb_005843_060 Hb_000946_130 Hb_000946_130 Hb_167457_010--Hb_000946_130 Hb_003186_050--Hb_011476_010 Hb_003186_050--Hb_004274_010 Hb_003186_050--Hb_001452_150 Hb_003186_050--Hb_000946_130 Hb_003427_040 Hb_003427_040 Hb_003186_050--Hb_003427_040 Hb_011476_010--Hb_004274_010 Hb_011476_010--Hb_001452_150 Hb_000914_010 Hb_000914_010 Hb_011476_010--Hb_000914_010 Hb_011476_010--Hb_003427_040 Hb_004274_010--Hb_001452_150 Hb_004274_010--Hb_003427_040 Hb_009826_010 Hb_009826_010 Hb_004274_010--Hb_009826_010 Hb_000029_220 Hb_000029_220 Hb_004274_010--Hb_000029_220 Hb_024248_010 Hb_024248_010 Hb_004274_010--Hb_024248_010 Hb_001452_150--Hb_003427_040 Hb_001452_150--Hb_009826_010 Hb_001452_150--Hb_024248_010 Hb_001452_150--Hb_000029_220 Hb_125116_020 Hb_125116_020 Hb_005843_060--Hb_125116_020 Hb_016835_020 Hb_016835_020 Hb_005843_060--Hb_016835_020 Hb_003462_170 Hb_003462_170 Hb_005843_060--Hb_003462_170 Hb_005843_060--Hb_003186_050 Hb_029727_010 Hb_029727_010 Hb_005843_060--Hb_029727_010 Hb_165396_010 Hb_165396_010 Hb_000946_130--Hb_165396_010 Hb_002542_050 Hb_002542_050 Hb_000946_130--Hb_002542_050 Hb_000946_130--Hb_011476_010 Hb_002157_060 Hb_002157_060 Hb_000946_130--Hb_002157_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0393867 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0617487 0.146769

CAGE analysis