Hb_148800_010

Information

Type -
Description -
Location Contig148800: 2508-5127
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148800_010 0.0 - - -
2 Hb_011872_010 0.1046732824 - - -
3 Hb_012539_030 0.2097418077 - - PREDICTED: uncharacterized protein LOC105638247 [Jatropha curcas]
4 Hb_000703_180 0.2133874313 - - PREDICTED: uncharacterized protein LOC104100193 [Nicotiana tomentosiformis]
5 Hb_004208_010 0.223092749 - - PREDICTED: uncharacterized protein LOC105914588 [Setaria italica]
6 Hb_007317_090 0.2326971583 - - PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Jatropha curcas]
7 Hb_038862_010 0.2470677106 - - PREDICTED: uncharacterized protein LOC104883809 [Beta vulgaris subsp. vulgaris]
8 Hb_146617_010 0.2518826778 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
9 Hb_007534_030 0.263299423 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
10 Hb_004466_050 0.2692213724 - - PREDICTED: uncharacterized protein LOC105649250, partial [Jatropha curcas]
11 Hb_001050_030 0.2718746051 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
12 Hb_007472_020 0.2733438796 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
13 Hb_000409_040 0.2741336869 transcription factor TF Family: AP2 hypothetical protein POPTR_0017s11470g [Populus trichocarpa]
14 Hb_005754_030 0.2764578469 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
15 Hb_146420_010 0.2832962392 - - alcohol dehydrogenase, putative [Ricinus communis]
16 Hb_000803_250 0.2866690223 - - PREDICTED: uncharacterized protein LOC105648317 isoform X1 [Jatropha curcas]
17 Hb_009710_020 0.287841497 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
18 Hb_011139_050 0.2884044081 - - nicotinate phosphoribosyltransferase family protein [Populus trichocarpa]
19 Hb_002918_020 0.2901994635 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.4 isoform X1 [Jatropha curcas]
20 Hb_167775_010 0.2917052128 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]

Gene co-expression network

sample Hb_148800_010 Hb_148800_010 Hb_011872_010 Hb_011872_010 Hb_148800_010--Hb_011872_010 Hb_012539_030 Hb_012539_030 Hb_148800_010--Hb_012539_030 Hb_000703_180 Hb_000703_180 Hb_148800_010--Hb_000703_180 Hb_004208_010 Hb_004208_010 Hb_148800_010--Hb_004208_010 Hb_007317_090 Hb_007317_090 Hb_148800_010--Hb_007317_090 Hb_038862_010 Hb_038862_010 Hb_148800_010--Hb_038862_010 Hb_011872_010--Hb_012539_030 Hb_001050_030 Hb_001050_030 Hb_011872_010--Hb_001050_030 Hb_011872_010--Hb_007317_090 Hb_011139_050 Hb_011139_050 Hb_011872_010--Hb_011139_050 Hb_011872_010--Hb_038862_010 Hb_002471_020 Hb_002471_020 Hb_012539_030--Hb_002471_020 Hb_000189_470 Hb_000189_470 Hb_012539_030--Hb_000189_470 Hb_001492_040 Hb_001492_040 Hb_012539_030--Hb_001492_040 Hb_087587_010 Hb_087587_010 Hb_012539_030--Hb_087587_010 Hb_122273_020 Hb_122273_020 Hb_012539_030--Hb_122273_020 Hb_159411_010 Hb_159411_010 Hb_012539_030--Hb_159411_010 Hb_000409_040 Hb_000409_040 Hb_000703_180--Hb_000409_040 Hb_000261_320 Hb_000261_320 Hb_000703_180--Hb_000261_320 Hb_001476_090 Hb_001476_090 Hb_000703_180--Hb_001476_090 Hb_004864_020 Hb_004864_020 Hb_000703_180--Hb_004864_020 Hb_002918_020 Hb_002918_020 Hb_000703_180--Hb_002918_020 Hb_007472_020 Hb_007472_020 Hb_000703_180--Hb_007472_020 Hb_032260_110 Hb_032260_110 Hb_004208_010--Hb_032260_110 Hb_001942_020 Hb_001942_020 Hb_004208_010--Hb_001942_020 Hb_106070_010 Hb_106070_010 Hb_004208_010--Hb_106070_010 Hb_001421_040 Hb_001421_040 Hb_004208_010--Hb_001421_040 Hb_003786_010 Hb_003786_010 Hb_004208_010--Hb_003786_010 Hb_114271_010 Hb_114271_010 Hb_004208_010--Hb_114271_010 Hb_005754_030 Hb_005754_030 Hb_007317_090--Hb_005754_030 Hb_000031_230 Hb_000031_230 Hb_007317_090--Hb_000031_230 Hb_000261_400 Hb_000261_400 Hb_007317_090--Hb_000261_400 Hb_002986_070 Hb_002986_070 Hb_007317_090--Hb_002986_070 Hb_000589_420 Hb_000589_420 Hb_007317_090--Hb_000589_420 Hb_006422_020 Hb_006422_020 Hb_007317_090--Hb_006422_020 Hb_012490_110 Hb_012490_110 Hb_038862_010--Hb_012490_110 Hb_136880_010 Hb_136880_010 Hb_038862_010--Hb_136880_010 Hb_004878_010 Hb_004878_010 Hb_038862_010--Hb_004878_010 Hb_000757_020 Hb_000757_020 Hb_038862_010--Hb_000757_020 Hb_155150_010 Hb_155150_010 Hb_038862_010--Hb_155150_010 Hb_038862_010--Hb_012539_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.193708 0.304187 0.185018 0.0784937 0 0.272106
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.180979 0.404553

CAGE analysis