Hb_114271_010

Information

Type -
Description -
Location Contig114271: 3461-4184
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP29305.1
description hypothetical protein JCGZ_19461 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAM7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19461 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114271_010 0.0 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
2 Hb_032260_110 0.1498843769 - - conserved hypothetical protein [Ricinus communis]
3 Hb_032733_020 0.1583944559 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like isoform X4 [Citrus sinensis]
4 Hb_004108_190 0.1755528806 - - PREDICTED: protein catecholamines up-like [Jatropha curcas]
5 Hb_129420_010 0.1929397857 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
6 Hb_013420_060 0.1989542672 - - NADH dehydrogenase subunit 7 [Nymphaea sp. Bergthorsson 0401]
7 Hb_002005_050 0.199870888 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
8 Hb_041813_090 0.2053149156 - - hypothetical protein EUGRSUZ_J01097 [Eucalyptus grandis]
9 Hb_000215_230 0.2076841084 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
10 Hb_001497_040 0.2108882166 - - hypothetical protein POPTR_0008s219701g, partial [Populus trichocarpa]
11 Hb_002028_280 0.2115257772 - - hypothetical protein RCOM_1397400 [Ricinus communis]
12 Hb_003333_040 0.2120533589 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_169948_010 0.2133016439 - - hypothetical protein VITISV_006524 [Vitis vinifera]
14 Hb_004208_010 0.2156740968 - - PREDICTED: uncharacterized protein LOC105914588 [Setaria italica]
15 Hb_002798_080 0.2191071875 - - hypothetical protein VITISV_043745 [Vitis vinifera]
16 Hb_000373_200 0.2294986677 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Populus euphratica]
17 Hb_003195_080 0.2302468599 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
18 Hb_000392_210 0.2310087783 transcription factor TF Family: TCP hypothetical protein POPTR_0004s04600g [Populus trichocarpa]
19 Hb_126933_010 0.231752013 - - PREDICTED: reticulon-like protein B5 [Jatropha curcas]
20 Hb_004954_020 0.2346085828 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_114271_010 Hb_114271_010 Hb_032260_110 Hb_032260_110 Hb_114271_010--Hb_032260_110 Hb_032733_020 Hb_032733_020 Hb_114271_010--Hb_032733_020 Hb_004108_190 Hb_004108_190 Hb_114271_010--Hb_004108_190 Hb_129420_010 Hb_129420_010 Hb_114271_010--Hb_129420_010 Hb_013420_060 Hb_013420_060 Hb_114271_010--Hb_013420_060 Hb_002005_050 Hb_002005_050 Hb_114271_010--Hb_002005_050 Hb_001497_040 Hb_001497_040 Hb_032260_110--Hb_001497_040 Hb_000215_230 Hb_000215_230 Hb_032260_110--Hb_000215_230 Hb_003786_010 Hb_003786_010 Hb_032260_110--Hb_003786_010 Hb_002798_080 Hb_002798_080 Hb_032260_110--Hb_002798_080 Hb_004208_010 Hb_004208_010 Hb_032260_110--Hb_004208_010 Hb_032733_020--Hb_013420_060 Hb_087797_010 Hb_087797_010 Hb_032733_020--Hb_087797_010 Hb_001691_170 Hb_001691_170 Hb_032733_020--Hb_001691_170 Hb_003333_040 Hb_003333_040 Hb_032733_020--Hb_003333_040 Hb_032733_020--Hb_002005_050 Hb_002028_280 Hb_002028_280 Hb_004108_190--Hb_002028_280 Hb_004108_190--Hb_000215_230 Hb_024066_040 Hb_024066_040 Hb_004108_190--Hb_024066_040 Hb_004954_020 Hb_004954_020 Hb_004108_190--Hb_004954_020 Hb_000392_210 Hb_000392_210 Hb_004108_190--Hb_000392_210 Hb_006483_120 Hb_006483_120 Hb_129420_010--Hb_006483_120 Hb_169948_010 Hb_169948_010 Hb_129420_010--Hb_169948_010 Hb_010620_030 Hb_010620_030 Hb_129420_010--Hb_010620_030 Hb_000552_010 Hb_000552_010 Hb_129420_010--Hb_000552_010 Hb_042463_010 Hb_042463_010 Hb_129420_010--Hb_042463_010 Hb_000574_330 Hb_000574_330 Hb_013420_060--Hb_000574_330 Hb_004712_200 Hb_004712_200 Hb_013420_060--Hb_004712_200 Hb_013420_060--Hb_003333_040 Hb_011900_020 Hb_011900_020 Hb_013420_060--Hb_011900_020 Hb_000029_380 Hb_000029_380 Hb_013420_060--Hb_000029_380 Hb_158247_010 Hb_158247_010 Hb_002005_050--Hb_158247_010 Hb_006970_030 Hb_006970_030 Hb_002005_050--Hb_006970_030 Hb_000161_010 Hb_000161_010 Hb_002005_050--Hb_000161_010 Hb_005305_070 Hb_005305_070 Hb_002005_050--Hb_005305_070 Hb_001699_140 Hb_001699_140 Hb_002005_050--Hb_001699_140 Hb_000101_330 Hb_000101_330 Hb_002005_050--Hb_000101_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.128563 0.0860256 0.156933 0.165904 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0381442 0.527091

CAGE analysis