Hb_087797_010

Information

Type -
Description -
Location Contig87797: 2-466
Sequence    

Annotation

kegg
ID rcu:RCOM_0733210
description kinase, putative (EC:2.7.10.2)
nr
ID XP_002520523.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9M1G3
description Probable L-type lectin-domain containing receptor kinase I.6 OS=Arabidopsis thaliana GN=LECRK16 PE=2 SV=1
trembl
ID B9S3F4
description Kinase, putative OS=Ricinus communis GN=RCOM_0733210 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_087797_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000261_390 0.1188736609 transcription factor TF Family: ARID PREDICTED: high mobility group B protein 15 [Jatropha curcas]
3 Hb_007044_020 0.1266275664 - - unnamed protein product [Vitis vinifera]
4 Hb_001832_180 0.1357248044 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
5 Hb_000009_470 0.13665831 - - Oxygen-evolving enhancer protein 1, chloroplast precursor, putative [Ricinus communis]
6 Hb_001289_050 0.1384206239 - - hypothetical protein Poptr_cp075 [Populus trichocarpa]
7 Hb_000282_100 0.1408297257 - - PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Jatropha curcas]
8 Hb_185274_010 0.1415645532 - - hypothetical protein ARALYDRAFT_330174 [Arabidopsis lyrata subsp. lyrata]
9 Hb_001135_170 0.1431507843 transcription factor TF Family: Orphans Two-component response regulator ARR2, putative [Ricinus communis]
10 Hb_000992_090 0.144050205 transcription factor TF Family: Orphans CIL, putative [Ricinus communis]
11 Hb_106552_030 0.1444523624 - - hypothetical protein POPTR_0006s23180g [Populus trichocarpa]
12 Hb_000841_040 0.1448608321 transcription factor TF Family: C2C2-CO-like transcription factor, putative [Ricinus communis]
13 Hb_001517_060 0.1450265277 - - phosphoribulose kinase, putative [Ricinus communis]
14 Hb_004807_040 0.1464081634 - - PREDICTED: uncharacterized protein LOC104420559 [Eucalyptus grandis]
15 Hb_075050_010 0.1469048002 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
16 Hb_009093_020 0.1472516702 - - PREDICTED: uncharacterized protein LOC105642100 [Jatropha curcas]
17 Hb_005399_040 0.1476932348 - - RNA polymerase beta subunit [Hevea brasiliensis]
18 Hb_011344_030 0.1486144555 - - PREDICTED: elongation factor G-2, chloroplastic [Jatropha curcas]
19 Hb_004631_020 0.1504946796 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
20 Hb_189208_030 0.1513600166 - - -

Gene co-expression network

sample Hb_087797_010 Hb_087797_010 Hb_000261_390 Hb_000261_390 Hb_087797_010--Hb_000261_390 Hb_007044_020 Hb_007044_020 Hb_087797_010--Hb_007044_020 Hb_001832_180 Hb_001832_180 Hb_087797_010--Hb_001832_180 Hb_000009_470 Hb_000009_470 Hb_087797_010--Hb_000009_470 Hb_001289_050 Hb_001289_050 Hb_087797_010--Hb_001289_050 Hb_000282_100 Hb_000282_100 Hb_087797_010--Hb_000282_100 Hb_001135_170 Hb_001135_170 Hb_000261_390--Hb_001135_170 Hb_000261_390--Hb_001832_180 Hb_011344_030 Hb_011344_030 Hb_000261_390--Hb_011344_030 Hb_023344_040 Hb_023344_040 Hb_000261_390--Hb_023344_040 Hb_004631_020 Hb_004631_020 Hb_000261_390--Hb_004631_020 Hb_001287_070 Hb_001287_070 Hb_000261_390--Hb_001287_070 Hb_000221_130 Hb_000221_130 Hb_007044_020--Hb_000221_130 Hb_007044_020--Hb_011344_030 Hb_003053_080 Hb_003053_080 Hb_007044_020--Hb_003053_080 Hb_010812_030 Hb_010812_030 Hb_007044_020--Hb_010812_030 Hb_007044_020--Hb_000009_470 Hb_001269_480 Hb_001269_480 Hb_007044_020--Hb_001269_480 Hb_000841_040 Hb_000841_040 Hb_001832_180--Hb_000841_040 Hb_003090_050 Hb_003090_050 Hb_001832_180--Hb_003090_050 Hb_000010_380 Hb_000010_380 Hb_001832_180--Hb_000010_380 Hb_001832_180--Hb_001135_170 Hb_001832_180--Hb_001287_070 Hb_001832_180--Hb_000282_100 Hb_000009_470--Hb_011344_030 Hb_001517_060 Hb_001517_060 Hb_000009_470--Hb_001517_060 Hb_000009_470--Hb_004631_020 Hb_002534_090 Hb_002534_090 Hb_000009_470--Hb_002534_090 Hb_004712_230 Hb_004712_230 Hb_000009_470--Hb_004712_230 Hb_004807_040 Hb_004807_040 Hb_001289_050--Hb_004807_040 Hb_001289_050--Hb_000282_100 Hb_009093_020 Hb_009093_020 Hb_001289_050--Hb_009093_020 Hb_001289_050--Hb_000841_040 Hb_011381_120 Hb_011381_120 Hb_001289_050--Hb_011381_120 Hb_001579_050 Hb_001579_050 Hb_001289_050--Hb_001579_050 Hb_000282_100--Hb_009093_020 Hb_000029_390 Hb_000029_390 Hb_000282_100--Hb_000029_390 Hb_000282_100--Hb_000841_040 Hb_000282_100--Hb_004631_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.461143 0.134691 2.41655 0.990175 0.0607279 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.199545 10.285

CAGE analysis