Hb_011872_010

Information

Type -
Description -
Location Contig11872: 14887-26938
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011872_010 0.0 - - -
2 Hb_148800_010 0.1046732824 - - -
3 Hb_012539_030 0.238756464 - - PREDICTED: uncharacterized protein LOC105638247 [Jatropha curcas]
4 Hb_001050_030 0.2432779335 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
5 Hb_007317_090 0.2512894504 - - PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Jatropha curcas]
6 Hb_011139_050 0.2703135177 - - nicotinate phosphoribosyltransferase family protein [Populus trichocarpa]
7 Hb_038862_010 0.2786339957 - - PREDICTED: uncharacterized protein LOC104883809 [Beta vulgaris subsp. vulgaris]
8 Hb_004208_010 0.283159156 - - PREDICTED: uncharacterized protein LOC105914588 [Setaria italica]
9 Hb_009710_020 0.2907044501 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
10 Hb_005754_030 0.2912393509 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
11 Hb_004466_050 0.291715333 - - PREDICTED: uncharacterized protein LOC105649250, partial [Jatropha curcas]
12 Hb_000703_180 0.2975817905 - - PREDICTED: uncharacterized protein LOC104100193 [Nicotiana tomentosiformis]
13 Hb_146617_010 0.2977547912 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
14 Hb_012490_110 0.3020736117 - - PREDICTED: uncharacterized membrane protein C776.05 [Jatropha curcas]
15 Hb_000123_030 0.3032434303 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
16 Hb_080952_050 0.3046005939 - - PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Nelumbo nucifera]
17 Hb_000206_190 0.3109656499 - - PREDICTED: F-box/LRR-repeat protein At4g14103-like [Pyrus x bretschneideri]
18 Hb_002636_040 0.3185728888 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH49 isoform X1 [Jatropha curcas]
19 Hb_002301_310 0.3202132525 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.4 isoform X1 [Jatropha curcas]
20 Hb_045870_010 0.3227415722 - - -

Gene co-expression network

sample Hb_011872_010 Hb_011872_010 Hb_148800_010 Hb_148800_010 Hb_011872_010--Hb_148800_010 Hb_012539_030 Hb_012539_030 Hb_011872_010--Hb_012539_030 Hb_001050_030 Hb_001050_030 Hb_011872_010--Hb_001050_030 Hb_007317_090 Hb_007317_090 Hb_011872_010--Hb_007317_090 Hb_011139_050 Hb_011139_050 Hb_011872_010--Hb_011139_050 Hb_038862_010 Hb_038862_010 Hb_011872_010--Hb_038862_010 Hb_148800_010--Hb_012539_030 Hb_000703_180 Hb_000703_180 Hb_148800_010--Hb_000703_180 Hb_004208_010 Hb_004208_010 Hb_148800_010--Hb_004208_010 Hb_148800_010--Hb_007317_090 Hb_148800_010--Hb_038862_010 Hb_002471_020 Hb_002471_020 Hb_012539_030--Hb_002471_020 Hb_000189_470 Hb_000189_470 Hb_012539_030--Hb_000189_470 Hb_001492_040 Hb_001492_040 Hb_012539_030--Hb_001492_040 Hb_087587_010 Hb_087587_010 Hb_012539_030--Hb_087587_010 Hb_122273_020 Hb_122273_020 Hb_012539_030--Hb_122273_020 Hb_159411_010 Hb_159411_010 Hb_012539_030--Hb_159411_010 Hb_000206_190 Hb_000206_190 Hb_001050_030--Hb_000206_190 Hb_000077_220 Hb_000077_220 Hb_001050_030--Hb_000077_220 Hb_002154_070 Hb_002154_070 Hb_001050_030--Hb_002154_070 Hb_002814_060 Hb_002814_060 Hb_001050_030--Hb_002814_060 Hb_000424_150 Hb_000424_150 Hb_001050_030--Hb_000424_150 Hb_003376_260 Hb_003376_260 Hb_001050_030--Hb_003376_260 Hb_005754_030 Hb_005754_030 Hb_007317_090--Hb_005754_030 Hb_000031_230 Hb_000031_230 Hb_007317_090--Hb_000031_230 Hb_000261_400 Hb_000261_400 Hb_007317_090--Hb_000261_400 Hb_002986_070 Hb_002986_070 Hb_007317_090--Hb_002986_070 Hb_000589_420 Hb_000589_420 Hb_007317_090--Hb_000589_420 Hb_006422_020 Hb_006422_020 Hb_007317_090--Hb_006422_020 Hb_000272_040 Hb_000272_040 Hb_011139_050--Hb_000272_040 Hb_011139_050--Hb_148800_010 Hb_000656_050 Hb_000656_050 Hb_011139_050--Hb_000656_050 Hb_011139_050--Hb_007317_090 Hb_004466_050 Hb_004466_050 Hb_011139_050--Hb_004466_050 Hb_012490_110 Hb_012490_110 Hb_038862_010--Hb_012490_110 Hb_136880_010 Hb_136880_010 Hb_038862_010--Hb_136880_010 Hb_004878_010 Hb_004878_010 Hb_038862_010--Hb_004878_010 Hb_000757_020 Hb_000757_020 Hb_038862_010--Hb_000757_020 Hb_155150_010 Hb_155150_010 Hb_038862_010--Hb_155150_010 Hb_038862_010--Hb_012539_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0468124 0.049953 0.0288223 0.0156453 0 0.0796468
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0270463 0.0696174

CAGE analysis