Hb_134326_010

Information

Type -
Description -
Location Contig134326: 68-938
Sequence    

Annotation

kegg
ID vvi:104882018
description uncharacterized LOC104882018
nr
ID XP_012077775.1
description PREDICTED: uncharacterized protein LOC105638562 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A5BIY7
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025425 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134326_010 0.0 - - PREDICTED: uncharacterized protein LOC105638562 [Jatropha curcas]
2 Hb_006618_020 0.1917461276 - - Vacuolar-processing enzyme precursor [Ricinus communis]
3 Hb_002739_070 0.2068606457 - - hypothetical protein B456_002G169900 [Gossypium raimondii]
4 Hb_000236_120 0.2108637176 - - -
5 Hb_006717_010 0.2114441123 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
6 Hb_002375_080 0.216950206 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002010_080 0.2186668594 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
8 Hb_001677_120 0.2194136677 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
9 Hb_002006_060 0.2206135446 - - PREDICTED: oleosin 1-like [Jatropha curcas]
10 Hb_001496_110 0.2264980759 - - hypothetical protein VITISV_044023 [Vitis vinifera]
11 Hb_000995_010 0.228030082 - - PREDICTED: uncharacterized protein LOC105635846 [Jatropha curcas]
12 Hb_027474_010 0.2294198408 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
13 Hb_001534_150 0.2307944889 - - PREDICTED: uncharacterized permease C29B12.14c [Jatropha curcas]
14 Hb_002097_210 0.2327276278 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007007_090 0.2338669799 - - phospholipase d beta, putative [Ricinus communis]
16 Hb_007802_010 0.2343120483 - - Receptor like protein 6, putative [Theobroma cacao]
17 Hb_000808_160 0.2346070777 - - PREDICTED: uncharacterized protein LOC105647443 [Jatropha curcas]
18 Hb_004143_140 0.2366879256 - - glycosyltransferase, partial [Arabidopsis thaliana]
19 Hb_005271_180 0.2368958357 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
20 Hb_001391_100 0.2381659014 - - AMP dependent ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_134326_010 Hb_134326_010 Hb_006618_020 Hb_006618_020 Hb_134326_010--Hb_006618_020 Hb_002739_070 Hb_002739_070 Hb_134326_010--Hb_002739_070 Hb_000236_120 Hb_000236_120 Hb_134326_010--Hb_000236_120 Hb_006717_010 Hb_006717_010 Hb_134326_010--Hb_006717_010 Hb_002375_080 Hb_002375_080 Hb_134326_010--Hb_002375_080 Hb_002010_080 Hb_002010_080 Hb_134326_010--Hb_002010_080 Hb_004605_020 Hb_004605_020 Hb_006618_020--Hb_004605_020 Hb_033312_090 Hb_033312_090 Hb_006618_020--Hb_033312_090 Hb_061908_020 Hb_061908_020 Hb_006618_020--Hb_061908_020 Hb_000522_130 Hb_000522_130 Hb_006618_020--Hb_000522_130 Hb_002006_060 Hb_002006_060 Hb_006618_020--Hb_002006_060 Hb_000369_070 Hb_000369_070 Hb_006618_020--Hb_000369_070 Hb_002475_130 Hb_002475_130 Hb_002739_070--Hb_002475_130 Hb_015882_020 Hb_015882_020 Hb_002739_070--Hb_015882_020 Hb_062229_010 Hb_062229_010 Hb_002739_070--Hb_062229_010 Hb_002739_070--Hb_000522_130 Hb_001921_010 Hb_001921_010 Hb_002739_070--Hb_001921_010 Hb_002739_070--Hb_006618_020 Hb_001699_050 Hb_001699_050 Hb_000236_120--Hb_001699_050 Hb_003602_090 Hb_003602_090 Hb_000236_120--Hb_003602_090 Hb_004032_250 Hb_004032_250 Hb_000236_120--Hb_004032_250 Hb_019040_010 Hb_019040_010 Hb_000236_120--Hb_019040_010 Hb_000236_120--Hb_002739_070 Hb_017604_020 Hb_017604_020 Hb_000236_120--Hb_017604_020 Hb_001195_250 Hb_001195_250 Hb_006717_010--Hb_001195_250 Hb_000567_240 Hb_000567_240 Hb_006717_010--Hb_000567_240 Hb_000103_410 Hb_000103_410 Hb_006717_010--Hb_000103_410 Hb_006717_010--Hb_002006_060 Hb_000589_420 Hb_000589_420 Hb_006717_010--Hb_000589_420 Hb_001948_090 Hb_001948_090 Hb_006717_010--Hb_001948_090 Hb_007007_090 Hb_007007_090 Hb_002375_080--Hb_007007_090 Hb_001677_120 Hb_001677_120 Hb_002375_080--Hb_001677_120 Hb_007102_010 Hb_007102_010 Hb_002375_080--Hb_007102_010 Hb_004837_110 Hb_004837_110 Hb_002375_080--Hb_004837_110 Hb_001821_050 Hb_001821_050 Hb_002375_080--Hb_001821_050 Hb_002097_130 Hb_002097_130 Hb_002375_080--Hb_002097_130 Hb_002010_080--Hb_007102_010 Hb_004724_300 Hb_004724_300 Hb_002010_080--Hb_004724_300 Hb_002010_080--Hb_001821_050 Hb_002010_080--Hb_002375_080 Hb_002010_080--Hb_004837_110 Hb_012799_040 Hb_012799_040 Hb_002010_080--Hb_012799_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.052583 0.220324 0.0406639 0.0945202 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0383299 0.0960702

CAGE analysis