Hb_000567_240

Information

Type -
Description -
Location Contig567: 283238-285316
Sequence    

Annotation

kegg
ID tcc:TCM_029690
description RNI superfamily protein
nr
ID XP_012091779.1
description PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Jatropha curcas]
swissprot
ID I1SSI5
description F-box/LRR-repeat MAX2 homolog A OS=Petunia hybrida GN=MAX2A PE=1 SV=1
trembl
ID A0A067JM75
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21571 PE=4 SV=1
Gene Ontology
ID GO:0044424
description f-box lrr-repeat max2 homolog a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000567_240 0.0 - - PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Jatropha curcas]
2 Hb_000589_420 0.1373550524 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]
3 Hb_006717_010 0.1392374359 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
4 Hb_004013_020 0.148305397 - - PREDICTED: F-box protein SKIP2 [Jatropha curcas]
5 Hb_000307_010 0.1701323391 - - PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas]
6 Hb_000065_090 0.1754132349 - - potassium channel tetramerization domain-containing protein, putative [Ricinus communis]
7 Hb_000753_120 0.1788761138 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
8 Hb_002073_090 0.1795877666 - - PREDICTED: copper transporter 6-like [Jatropha curcas]
9 Hb_001541_160 0.1796994261 - - PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Jatropha curcas]
10 Hb_172421_010 0.1835465873 - - cysteine protease [Hevea brasiliensis]
11 Hb_002006_060 0.1837146077 - - PREDICTED: oleosin 1-like [Jatropha curcas]
12 Hb_000345_110 0.1904431345 - - PREDICTED: uncharacterized protein LOC105647507 [Jatropha curcas]
13 Hb_000230_470 0.1935985172 - - PREDICTED: mitogen-activated protein kinase 15 isoform X2 [Jatropha curcas]
14 Hb_005155_010 0.1963008366 - - amino acid transporter, putative [Ricinus communis]
15 Hb_006911_020 0.1975527091 - - CC-NBS-LRR protein isoform 1 [Theobroma cacao]
16 Hb_167775_010 0.1996977008 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
17 Hb_007313_070 0.2004916986 - - PREDICTED: gibberellin receptor GID1C [Jatropha curcas]
18 Hb_002368_030 0.2017028761 transcription factor TF Family: GRAS PREDICTED: DELLA protein GAIP-B [Jatropha curcas]
19 Hb_000579_030 0.201980166 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 3 [Jatropha curcas]
20 Hb_000042_060 0.2038415767 - - PREDICTED: uncharacterized protein LOC105632794 [Jatropha curcas]

Gene co-expression network

sample Hb_000567_240 Hb_000567_240 Hb_000589_420 Hb_000589_420 Hb_000567_240--Hb_000589_420 Hb_006717_010 Hb_006717_010 Hb_000567_240--Hb_006717_010 Hb_004013_020 Hb_004013_020 Hb_000567_240--Hb_004013_020 Hb_000307_010 Hb_000307_010 Hb_000567_240--Hb_000307_010 Hb_000065_090 Hb_000065_090 Hb_000567_240--Hb_000065_090 Hb_000753_120 Hb_000753_120 Hb_000567_240--Hb_000753_120 Hb_000556_070 Hb_000556_070 Hb_000589_420--Hb_000556_070 Hb_167775_010 Hb_167775_010 Hb_000589_420--Hb_167775_010 Hb_000589_420--Hb_006717_010 Hb_000321_120 Hb_000321_120 Hb_000589_420--Hb_000321_120 Hb_003912_080 Hb_003912_080 Hb_000589_420--Hb_003912_080 Hb_001195_250 Hb_001195_250 Hb_006717_010--Hb_001195_250 Hb_000103_410 Hb_000103_410 Hb_006717_010--Hb_000103_410 Hb_002006_060 Hb_002006_060 Hb_006717_010--Hb_002006_060 Hb_001948_090 Hb_001948_090 Hb_006717_010--Hb_001948_090 Hb_004013_020--Hb_000753_120 Hb_000975_370 Hb_000975_370 Hb_004013_020--Hb_000975_370 Hb_000836_600 Hb_000836_600 Hb_004013_020--Hb_000836_600 Hb_000230_470 Hb_000230_470 Hb_004013_020--Hb_000230_470 Hb_004013_020--Hb_000065_090 Hb_001541_160 Hb_001541_160 Hb_004013_020--Hb_001541_160 Hb_000307_010--Hb_000065_090 Hb_004116_180 Hb_004116_180 Hb_000307_010--Hb_004116_180 Hb_000307_010--Hb_004013_020 Hb_002368_030 Hb_002368_030 Hb_000307_010--Hb_002368_030 Hb_004994_300 Hb_004994_300 Hb_000307_010--Hb_004994_300 Hb_000065_090--Hb_004116_180 Hb_033152_100 Hb_033152_100 Hb_000065_090--Hb_033152_100 Hb_000221_090 Hb_000221_090 Hb_000065_090--Hb_000221_090 Hb_001133_010 Hb_001133_010 Hb_000065_090--Hb_001133_010 Hb_000753_120--Hb_000230_470 Hb_002909_100 Hb_002909_100 Hb_000753_120--Hb_002909_100 Hb_005408_100 Hb_005408_100 Hb_000753_120--Hb_005408_100 Hb_031089_050 Hb_031089_050 Hb_000753_120--Hb_031089_050 Hb_000753_120--Hb_001948_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.94271 27.0927 6.79014 13.769 3.03315 2.40737
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.129726 0.476343 2.16367 1.87412 17.4207

CAGE analysis