Hb_000522_130

Information

Type -
Description -
Location Contig522: 87011-88822
Sequence    

Annotation

kegg
ID rcu:RCOM_0492410
description hypothetical protein
nr
ID XP_012069793.1
description PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02294 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46843: 87007-89036
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000522_130 0.0 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
2 Hb_033312_090 0.0929385123 - - PREDICTED: HMG-Y-related protein A-like isoform X1 [Jatropha curcas]
3 Hb_012098_180 0.1002295685 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
4 Hb_001538_050 0.10136933 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
5 Hb_003914_050 0.1026086387 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
6 Hb_008040_060 0.103896561 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
7 Hb_000705_130 0.1076984675 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000819_010 0.1080704941 - - Receptor-like protein kinase 1, putative [Theobroma cacao]
9 Hb_000094_010 0.1087845815 - - lrr receptor protein kinase, putative [Ricinus communis]
10 Hb_000808_160 0.1095219536 - - PREDICTED: uncharacterized protein LOC105647443 [Jatropha curcas]
11 Hb_000027_060 0.1201315368 - - hypothetical protein POPTR_0004s07470g [Populus trichocarpa]
12 Hb_000369_070 0.1209630315 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
13 Hb_017604_020 0.1226324694 - - hypothetical protein JCGZ_22673 [Jatropha curcas]
14 Hb_015882_020 0.1246567145 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
15 Hb_073119_010 0.1250089454 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
16 Hb_001515_030 0.1254630036 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_006618_020 0.1282633207 - - Vacuolar-processing enzyme precursor [Ricinus communis]
18 Hb_000402_030 0.1320706355 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
19 Hb_000976_340 0.1340330634 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
20 Hb_002529_080 0.1343594738 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]

Gene co-expression network

sample Hb_000522_130 Hb_000522_130 Hb_033312_090 Hb_033312_090 Hb_000522_130--Hb_033312_090 Hb_012098_180 Hb_012098_180 Hb_000522_130--Hb_012098_180 Hb_001538_050 Hb_001538_050 Hb_000522_130--Hb_001538_050 Hb_003914_050 Hb_003914_050 Hb_000522_130--Hb_003914_050 Hb_008040_060 Hb_008040_060 Hb_000522_130--Hb_008040_060 Hb_000705_130 Hb_000705_130 Hb_000522_130--Hb_000705_130 Hb_015882_020 Hb_015882_020 Hb_033312_090--Hb_015882_020 Hb_005569_030 Hb_005569_030 Hb_033312_090--Hb_005569_030 Hb_033312_090--Hb_000705_130 Hb_033312_090--Hb_001538_050 Hb_033312_090--Hb_008040_060 Hb_012098_180--Hb_001538_050 Hb_000237_070 Hb_000237_070 Hb_012098_180--Hb_000237_070 Hb_012098_180--Hb_003914_050 Hb_002890_320 Hb_002890_320 Hb_012098_180--Hb_002890_320 Hb_001123_170 Hb_001123_170 Hb_012098_180--Hb_001123_170 Hb_001538_050--Hb_000237_070 Hb_001538_050--Hb_001123_170 Hb_001377_130 Hb_001377_130 Hb_001538_050--Hb_001377_130 Hb_000382_030 Hb_000382_030 Hb_001538_050--Hb_000382_030 Hb_002529_080 Hb_002529_080 Hb_003914_050--Hb_002529_080 Hb_000094_010 Hb_000094_010 Hb_003914_050--Hb_000094_010 Hb_003914_050--Hb_008040_060 Hb_008667_030 Hb_008667_030 Hb_003914_050--Hb_008667_030 Hb_000027_060 Hb_000027_060 Hb_003914_050--Hb_000027_060 Hb_008040_060--Hb_002529_080 Hb_001248_170 Hb_001248_170 Hb_008040_060--Hb_001248_170 Hb_008040_060--Hb_000027_060 Hb_000000_070 Hb_000000_070 Hb_008040_060--Hb_000000_070 Hb_008040_060--Hb_008667_030 Hb_000705_130--Hb_015882_020 Hb_000705_130--Hb_000027_060 Hb_000331_710 Hb_000331_710 Hb_000705_130--Hb_000331_710 Hb_000705_130--Hb_008040_060 Hb_001534_150 Hb_001534_150 Hb_000705_130--Hb_001534_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.882701 47.3809 14.6521 13.335 0.454687 0.641616
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.377934 0.158591 0.337377 11.7236 12.9475

CAGE analysis