Hb_113034_010

Information

Type -
Description -
Location Contig113034: 3251-4087
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113034_010 0.0 - - -
2 Hb_032299_060 0.3309616472 - - PREDICTED: protein UPSTREAM OF FLC-like [Elaeis guineensis]
3 Hb_000740_120 0.3360056647 - - -
4 Hb_000085_080 0.3467616147 - - PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]
5 Hb_000816_270 0.3516061397 - - -
6 Hb_003927_110 0.3682179631 - - hypothetical protein PRUPE_ppa001478mg [Prunus persica]
7 Hb_002815_070 0.3693365002 - - hypothetical protein PHAVU_005G048300g [Phaseolus vulgaris]
8 Hb_011206_020 0.3796803123 - - -
9 Hb_030627_080 0.3814085155 - - protein with unknown function [Ricinus communis]
10 Hb_164096_010 0.3831307406 - - hypothetical protein L484_021244 [Morus notabilis]
11 Hb_001623_320 0.3908707122 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 isoform X1 [Populus euphratica]
12 Hb_033044_010 0.3926329484 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5-like isoform X3 [Gossypium raimondii]
13 Hb_000103_260 0.3948719193 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
14 Hb_135940_010 0.3955805317 - - hypothetical protein JCGZ_18294 [Jatropha curcas]
15 Hb_030982_020 0.3960099792 - - PREDICTED: ubiquitin domain-containing protein 1 [Jatropha curcas]
16 Hb_007763_030 0.3969033007 - - PREDICTED: uncharacterized protein LOC105638154 [Jatropha curcas]
17 Hb_001260_030 0.3989757585 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002748_030 0.4003265112 - - nucleotide binding protein, putative [Ricinus communis]
19 Hb_018117_020 0.403817309 - - PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
20 Hb_021596_080 0.4044970492 - - 50S ribosomal protein L33A [Hevea brasiliensis]

Gene co-expression network

sample Hb_113034_010 Hb_113034_010 Hb_032299_060 Hb_032299_060 Hb_113034_010--Hb_032299_060 Hb_000740_120 Hb_000740_120 Hb_113034_010--Hb_000740_120 Hb_000085_080 Hb_000085_080 Hb_113034_010--Hb_000085_080 Hb_000816_270 Hb_000816_270 Hb_113034_010--Hb_000816_270 Hb_003927_110 Hb_003927_110 Hb_113034_010--Hb_003927_110 Hb_002815_070 Hb_002815_070 Hb_113034_010--Hb_002815_070 Hb_184403_010 Hb_184403_010 Hb_032299_060--Hb_184403_010 Hb_003321_020 Hb_003321_020 Hb_032299_060--Hb_003321_020 Hb_013429_020 Hb_013429_020 Hb_032299_060--Hb_013429_020 Hb_183612_030 Hb_183612_030 Hb_032299_060--Hb_183612_030 Hb_003117_040 Hb_003117_040 Hb_032299_060--Hb_003117_040 Hb_020580_010 Hb_020580_010 Hb_032299_060--Hb_020580_010 Hb_011206_020 Hb_011206_020 Hb_000740_120--Hb_011206_020 Hb_052402_010 Hb_052402_010 Hb_000740_120--Hb_052402_010 Hb_131652_010 Hb_131652_010 Hb_000740_120--Hb_131652_010 Hb_033044_010 Hb_033044_010 Hb_000740_120--Hb_033044_010 Hb_002942_180 Hb_002942_180 Hb_000740_120--Hb_002942_180 Hb_130367_010 Hb_130367_010 Hb_000740_120--Hb_130367_010 Hb_004553_020 Hb_004553_020 Hb_000085_080--Hb_004553_020 Hb_100804_010 Hb_100804_010 Hb_000085_080--Hb_100804_010 Hb_001662_060 Hb_001662_060 Hb_000085_080--Hb_001662_060 Hb_011316_020 Hb_011316_020 Hb_000085_080--Hb_011316_020 Hb_000436_080 Hb_000436_080 Hb_000085_080--Hb_000436_080 Hb_007765_020 Hb_007765_020 Hb_000085_080--Hb_007765_020 Hb_004228_090 Hb_004228_090 Hb_000816_270--Hb_004228_090 Hb_007125_010 Hb_007125_010 Hb_000816_270--Hb_007125_010 Hb_002311_060 Hb_002311_060 Hb_000816_270--Hb_002311_060 Hb_161929_010 Hb_161929_010 Hb_000816_270--Hb_161929_010 Hb_003760_040 Hb_003760_040 Hb_000816_270--Hb_003760_040 Hb_001277_310 Hb_001277_310 Hb_000816_270--Hb_001277_310 Hb_000516_060 Hb_000516_060 Hb_003927_110--Hb_000516_060 Hb_005062_080 Hb_005062_080 Hb_003927_110--Hb_005062_080 Hb_000005_250 Hb_000005_250 Hb_003927_110--Hb_000005_250 Hb_003893_140 Hb_003893_140 Hb_003927_110--Hb_003893_140 Hb_005873_010 Hb_005873_010 Hb_003927_110--Hb_005873_010 Hb_000120_390 Hb_000120_390 Hb_003927_110--Hb_000120_390 Hb_000160_160 Hb_000160_160 Hb_002815_070--Hb_000160_160 Hb_012627_020 Hb_012627_020 Hb_002815_070--Hb_012627_020 Hb_000599_100 Hb_000599_100 Hb_002815_070--Hb_000599_100 Hb_017462_010 Hb_017462_010 Hb_002815_070--Hb_017462_010 Hb_004448_090 Hb_004448_090 Hb_002815_070--Hb_004448_090 Hb_005679_070 Hb_005679_070 Hb_002815_070--Hb_005679_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0796726 0.161235 0 0.311105
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.221533 0 0.273646 0.301773 0

CAGE analysis