Hb_100804_010

Information

Type -
Description -
Location Contig100804: 387-1184
Sequence    

Annotation

kegg
ID tcc:TCM_021186
description BAHD family acyltransferase, clade V, putative
nr
ID XP_007035554.1
description BAHD family acyltransferase, clade V, putative [Theobroma cacao]
swissprot
ID Q94CD1
description Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1
trembl
ID A0A061EN55
description BAHD family acyltransferase, clade V, putative OS=Theobroma cacao GN=TCM_021186 PE=4 SV=1
Gene Ontology
ID GO:0016747
description omega-hydroxypalmitate o-feruloyl transferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100804_010 0.0 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
2 Hb_023292_010 0.11635174 - - Cucumisin precursor, putative [Ricinus communis]
3 Hb_001073_050 0.1277583783 - - -
4 Hb_006472_050 0.1514670521 - - PREDICTED: ubiquitin-conjugating enzyme E2 7 isoform X2 [Elaeis guineensis]
5 Hb_001153_220 0.1565124717 - - PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Jatropha curcas]
6 Hb_001357_080 0.1589156167 - - hypothetical protein POPTR_0005s15590g [Populus trichocarpa]
7 Hb_000363_160 0.1625441458 - - Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis]
8 Hb_003680_190 0.1630489478 - - hypothetical protein POPTR_0006s11880g [Populus trichocarpa]
9 Hb_005188_090 0.1690656232 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
10 Hb_005625_020 0.1707493218 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 [Jatropha curcas]
11 Hb_004056_030 0.1754900399 - - hypothetical protein 33 [Hevea brasiliensis]
12 Hb_001053_150 0.1757181002 - - -
13 Hb_002603_160 0.1760256485 - - Arginyl-tRNA--protein transferase, putative [Ricinus communis]
14 Hb_001153_060 0.1775623408 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004429_070 0.1789176067 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
16 Hb_000172_560 0.1809527452 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Jatropha curcas]
17 Hb_064997_010 0.181078676 - - hypothetical protein JCGZ_19852 [Jatropha curcas]
18 Hb_001633_170 0.1815626993 - - PREDICTED: aspartokinase 2, chloroplastic-like isoform X1 [Jatropha curcas]
19 Hb_002290_040 0.1816431729 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000162_040 0.1820206606 - - PREDICTED: pentatricopeptide repeat-containing protein At2g21090 [Jatropha curcas]

Gene co-expression network

sample Hb_100804_010 Hb_100804_010 Hb_023292_010 Hb_023292_010 Hb_100804_010--Hb_023292_010 Hb_001073_050 Hb_001073_050 Hb_100804_010--Hb_001073_050 Hb_006472_050 Hb_006472_050 Hb_100804_010--Hb_006472_050 Hb_001153_220 Hb_001153_220 Hb_100804_010--Hb_001153_220 Hb_001357_080 Hb_001357_080 Hb_100804_010--Hb_001357_080 Hb_000363_160 Hb_000363_160 Hb_100804_010--Hb_000363_160 Hb_023292_010--Hb_001073_050 Hb_023292_010--Hb_001357_080 Hb_003018_190 Hb_003018_190 Hb_023292_010--Hb_003018_190 Hb_002603_160 Hb_002603_160 Hb_023292_010--Hb_002603_160 Hb_006935_050 Hb_006935_050 Hb_023292_010--Hb_006935_050 Hb_010436_060 Hb_010436_060 Hb_001073_050--Hb_010436_060 Hb_004056_030 Hb_004056_030 Hb_001073_050--Hb_004056_030 Hb_001073_050--Hb_002603_160 Hb_064441_010 Hb_064441_010 Hb_001073_050--Hb_064441_010 Hb_001073_050--Hb_001357_080 Hb_002182_030 Hb_002182_030 Hb_006472_050--Hb_002182_030 Hb_001135_210 Hb_001135_210 Hb_006472_050--Hb_001135_210 Hb_000963_180 Hb_000963_180 Hb_006472_050--Hb_000963_180 Hb_000224_120 Hb_000224_120 Hb_006472_050--Hb_000224_120 Hb_000046_290 Hb_000046_290 Hb_006472_050--Hb_000046_290 Hb_001153_060 Hb_001153_060 Hb_006472_050--Hb_001153_060 Hb_025214_130 Hb_025214_130 Hb_001153_220--Hb_025214_130 Hb_064997_010 Hb_064997_010 Hb_001153_220--Hb_064997_010 Hb_001959_160 Hb_001959_160 Hb_001153_220--Hb_001959_160 Hb_024952_010 Hb_024952_010 Hb_001153_220--Hb_024952_010 Hb_002290_040 Hb_002290_040 Hb_001153_220--Hb_002290_040 Hb_001153_220--Hb_023292_010 Hb_002539_090 Hb_002539_090 Hb_001357_080--Hb_002539_090 Hb_000046_110 Hb_000046_110 Hb_001357_080--Hb_000046_110 Hb_001357_080--Hb_010436_060 Hb_000751_130 Hb_000751_130 Hb_001357_080--Hb_000751_130 Hb_006641_010 Hb_006641_010 Hb_001357_080--Hb_006641_010 Hb_029866_070 Hb_029866_070 Hb_001357_080--Hb_029866_070 Hb_003943_040 Hb_003943_040 Hb_000363_160--Hb_003943_040 Hb_000359_010 Hb_000359_010 Hb_000363_160--Hb_000359_010 Hb_005625_020 Hb_005625_020 Hb_000363_160--Hb_005625_020 Hb_002687_110 Hb_002687_110 Hb_000363_160--Hb_002687_110 Hb_000029_020 Hb_000029_020 Hb_000363_160--Hb_000029_020 Hb_000898_050 Hb_000898_050 Hb_000363_160--Hb_000898_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0882791 0.0790611 0.0691224 0.20619 0.141911 0.484019
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.338555 0.319445 1.05913 0.0862068 0.106847

CAGE analysis