Hb_130367_010

Information

Type -
Description -
Location Contig130367: 1002-1540
Sequence    

Annotation

kegg
ID pop:POPTR_0003s01540g
description POPTRDRAFT_553449; hypothetical protein
nr
ID XP_012071364.1
description PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L469
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05051 PE=4 SV=1
Gene Ontology
ID GO:0016758
description sterol 3-beta-glucosyltransferase ugt80b1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09064: 1220-1969
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_130367_010 0.0 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Jatropha curcas]
2 Hb_022891_010 0.1315901948 - - chitinase-like protein [Hevea brasiliensis]
3 Hb_006910_050 0.1431019289 - - hypothetical protein CISIN_1g0480481mg, partial [Citrus sinensis]
4 Hb_002815_050 0.1701094197 - - PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial [Populus euphratica]
5 Hb_007188_030 0.2052567526 - - PREDICTED: DNA topoisomerase 3-alpha-like [Malus domestica]
6 Hb_003030_040 0.2054570634 - - hypothetical protein CISIN_1g0466212mg, partial [Citrus sinensis]
7 Hb_001089_080 0.2059773795 - - hypothetical protein glysoja_044047 [Glycine soja]
8 Hb_032258_020 0.2104837257 - - PREDICTED: amidase 1-like isoform X2 [Malus domestica]
9 Hb_007527_070 0.2120119574 - - PREDICTED: uncharacterized protein LOC105637197 [Jatropha curcas]
10 Hb_000034_090 0.2286573987 transcription factor TF Family: M-type MPF2-like, partial [Dunalia fasciculata]
11 Hb_029142_020 0.2307469389 - - hypothetical protein POPTR_0004s23900g [Populus trichocarpa]
12 Hb_000098_300 0.2308370859 - - -
13 Hb_005679_070 0.2311546676 - - hypothetical protein M569_07741, partial [Genlisea aurea]
14 Hb_000181_150 0.241936418 - - hypothetical protein PHAVU_011G1647000g, partial [Phaseolus vulgaris]
15 Hb_006198_090 0.245016552 - - PREDICTED: vesicle-associated membrane protein 721-like isoform X2 [Tarenaya hassleriana]
16 Hb_001998_140 0.2455840964 - - -
17 Hb_003656_150 0.2479863174 - - -
18 Hb_005107_020 0.2499736893 - - hypothetical protein JCGZ_25266 [Jatropha curcas]
19 Hb_005271_230 0.2529626452 - - PREDICTED: uncharacterized protein LOC105645849 isoform X4 [Jatropha curcas]
20 Hb_000168_010 0.2557935475 - - PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_130367_010 Hb_130367_010 Hb_022891_010 Hb_022891_010 Hb_130367_010--Hb_022891_010 Hb_006910_050 Hb_006910_050 Hb_130367_010--Hb_006910_050 Hb_002815_050 Hb_002815_050 Hb_130367_010--Hb_002815_050 Hb_007188_030 Hb_007188_030 Hb_130367_010--Hb_007188_030 Hb_003030_040 Hb_003030_040 Hb_130367_010--Hb_003030_040 Hb_001089_080 Hb_001089_080 Hb_130367_010--Hb_001089_080 Hb_022891_010--Hb_002815_050 Hb_000034_090 Hb_000034_090 Hb_022891_010--Hb_000034_090 Hb_022891_010--Hb_007188_030 Hb_000098_300 Hb_000098_300 Hb_022891_010--Hb_000098_300 Hb_022891_010--Hb_003030_040 Hb_007527_070 Hb_007527_070 Hb_006910_050--Hb_007527_070 Hb_006910_050--Hb_022891_010 Hb_005271_230 Hb_005271_230 Hb_006910_050--Hb_005271_230 Hb_047691_010 Hb_047691_010 Hb_006910_050--Hb_047691_010 Hb_002611_030 Hb_002611_030 Hb_006910_050--Hb_002611_030 Hb_005679_070 Hb_005679_070 Hb_002815_050--Hb_005679_070 Hb_002815_050--Hb_003030_040 Hb_002815_050--Hb_007188_030 Hb_003656_150 Hb_003656_150 Hb_002815_050--Hb_003656_150 Hb_068014_010 Hb_068014_010 Hb_002815_050--Hb_068014_010 Hb_007188_030--Hb_003656_150 Hb_006198_090 Hb_006198_090 Hb_007188_030--Hb_006198_090 Hb_177103_010 Hb_177103_010 Hb_007188_030--Hb_177103_010 Hb_007188_030--Hb_003030_040 Hb_007188_030--Hb_005679_070 Hb_031866_050 Hb_031866_050 Hb_003030_040--Hb_031866_050 Hb_003030_040--Hb_003656_150 Hb_005107_020 Hb_005107_020 Hb_003030_040--Hb_005107_020 Hb_003030_040--Hb_005679_070 Hb_021943_070 Hb_021943_070 Hb_001089_080--Hb_021943_070 Hb_001089_080--Hb_005107_020 Hb_001579_260 Hb_001579_260 Hb_001089_080--Hb_001579_260 Hb_001089_080--Hb_022891_010 Hb_008096_020 Hb_008096_020 Hb_001089_080--Hb_008096_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.445593 0.394977 23.2534 0.407062 26.1575
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.26813 1.30369 4.69909 8.89459 4.9815

CAGE analysis