Hb_111973_010

Information

Type -
Description -
Location Contig111973: 19-520
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111973_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_000757_100 0.1362720951 - - SPla/RYanodine receptor domain-containing protein isoform 2 [Theobroma cacao]
3 Hb_003430_060 0.1370588775 - - PREDICTED: potassium transporter 23 isoform X2 [Elaeis guineensis]
4 Hb_002454_020 0.1434239409 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 9 [Vitis vinifera]
5 Hb_013358_080 0.144277528 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Jatropha curcas]
6 Hb_117038_010 0.1446329084 - - cysteine protease [Hevea brasiliensis]
7 Hb_000453_100 0.1512883462 - - PREDICTED: metallothionein-like protein 1 [Sesamum indicum]
8 Hb_006637_020 0.1554318333 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
9 Hb_001195_470 0.1613789633 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
10 Hb_131035_010 0.1618546049 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_001205_110 0.163698675 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 4 [Jatropha curcas]
12 Hb_007508_080 0.1648513576 - - PREDICTED: presenilin-like protein At2g29900 [Jatropha curcas]
13 Hb_001486_070 0.165417866 - - PREDICTED: 5'-adenylylsulfate reductase-like 7 [Jatropha curcas]
14 Hb_000723_220 0.1683054942 - - PREDICTED: uncharacterized protein LOC105642234 [Jatropha curcas]
15 Hb_010697_040 0.171341937 - - PREDICTED: protein GPR107 isoform X1 [Jatropha curcas]
16 Hb_008749_030 0.171990004 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
17 Hb_013358_090 0.1724572386 - - hypothetical protein Csa_4G652025 [Cucumis sativus]
18 Hb_002311_100 0.172534279 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Jatropha curcas]
19 Hb_002662_020 0.1733711853 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
20 Hb_008103_020 0.173838689 - - hypothetical protein POPTR_0003s20310g [Populus trichocarpa]

Gene co-expression network

sample Hb_111973_010 Hb_111973_010 Hb_000757_100 Hb_000757_100 Hb_111973_010--Hb_000757_100 Hb_003430_060 Hb_003430_060 Hb_111973_010--Hb_003430_060 Hb_002454_020 Hb_002454_020 Hb_111973_010--Hb_002454_020 Hb_013358_080 Hb_013358_080 Hb_111973_010--Hb_013358_080 Hb_117038_010 Hb_117038_010 Hb_111973_010--Hb_117038_010 Hb_000453_100 Hb_000453_100 Hb_111973_010--Hb_000453_100 Hb_024074_040 Hb_024074_040 Hb_000757_100--Hb_024074_040 Hb_006637_020 Hb_006637_020 Hb_000757_100--Hb_006637_020 Hb_010697_040 Hb_010697_040 Hb_000757_100--Hb_010697_040 Hb_002400_460 Hb_002400_460 Hb_000757_100--Hb_002400_460 Hb_000757_100--Hb_002454_020 Hb_000757_100--Hb_003430_060 Hb_007508_080 Hb_007508_080 Hb_003430_060--Hb_007508_080 Hb_005321_020 Hb_005321_020 Hb_003430_060--Hb_005321_020 Hb_000574_100 Hb_000574_100 Hb_003430_060--Hb_000574_100 Hb_002111_070 Hb_002111_070 Hb_003430_060--Hb_002111_070 Hb_003430_060--Hb_010697_040 Hb_000563_640 Hb_000563_640 Hb_003430_060--Hb_000563_640 Hb_001357_270 Hb_001357_270 Hb_002454_020--Hb_001357_270 Hb_000922_370 Hb_000922_370 Hb_002454_020--Hb_000922_370 Hb_000318_510 Hb_000318_510 Hb_002454_020--Hb_000318_510 Hb_000347_180 Hb_000347_180 Hb_002454_020--Hb_000347_180 Hb_056196_050 Hb_056196_050 Hb_002454_020--Hb_056196_050 Hb_000600_070 Hb_000600_070 Hb_002454_020--Hb_000600_070 Hb_013358_090 Hb_013358_090 Hb_013358_080--Hb_013358_090 Hb_081517_010 Hb_081517_010 Hb_013358_080--Hb_081517_010 Hb_181328_010 Hb_181328_010 Hb_013358_080--Hb_181328_010 Hb_001948_130 Hb_001948_130 Hb_013358_080--Hb_001948_130 Hb_074197_020 Hb_074197_020 Hb_013358_080--Hb_074197_020 Hb_001195_470 Hb_001195_470 Hb_117038_010--Hb_001195_470 Hb_001486_070 Hb_001486_070 Hb_117038_010--Hb_001486_070 Hb_008749_030 Hb_008749_030 Hb_117038_010--Hb_008749_030 Hb_001205_110 Hb_001205_110 Hb_117038_010--Hb_001205_110 Hb_002662_050 Hb_002662_050 Hb_117038_010--Hb_002662_050 Hb_000011_190 Hb_000011_190 Hb_000453_100--Hb_000011_190 Hb_000453_100--Hb_001486_070 Hb_003203_020 Hb_003203_020 Hb_000453_100--Hb_003203_020 Hb_008177_030 Hb_008177_030 Hb_000453_100--Hb_008177_030 Hb_000453_100--Hb_003430_060 Hb_078477_050 Hb_078477_050 Hb_000453_100--Hb_078477_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.87246 5.77103 0.684137 8.23771 2.37013 6.82306
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.33343 0.628512 3.37452 3.56953 2.94006

CAGE analysis