Hb_081517_010

Information

Type -
Description -
Location Contig81517: 1784-3250
Sequence    

Annotation

kegg
ID rcu:RCOM_0285890
description Potassium transporter, putative
nr
ID XP_012085343.1
description PREDICTED: putative potassium transporter 12 isoform X2 [Jatropha curcas]
swissprot
ID O80739
description Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2
trembl
ID A0A067JRI0
description Potassium transporter OS=Jatropha curcas GN=JCGZ_17719 PE=3 SV=1
Gene Ontology
ID GO:0009507
description potassium transporter 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081517_010 0.0 - - PREDICTED: putative potassium transporter 12 isoform X2 [Jatropha curcas]
2 Hb_013358_080 0.1345711616 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Jatropha curcas]
3 Hb_001386_140 0.1493226779 - - PREDICTED: B2 protein [Jatropha curcas]
4 Hb_115477_010 0.1649472814 - - Protein dom-3, putative [Ricinus communis]
5 Hb_007333_040 0.1664118571 - - PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max]
6 Hb_115107_010 0.1702263475 - - Early-responsive to dehydration stress protein (ERD4) isoform 1 [Theobroma cacao]
7 Hb_003633_040 0.1703031482 - - hypothetical protein B456_008G146200 [Gossypium raimondii]
8 Hb_054586_020 0.171154519 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
9 Hb_013358_090 0.1724190337 - - hypothetical protein Csa_4G652025 [Cucumis sativus]
10 Hb_010565_010 0.1751047108 - - PREDICTED: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like isoform X2 [Populus euphratica]
11 Hb_009119_040 0.1786365265 - - PREDICTED: tobamovirus multiplication protein 2A [Jatropha curcas]
12 Hb_009529_040 0.1819992515 - - PREDICTED: transmembrane protein 120 homolog isoform X1 [Malus domestica]
13 Hb_111973_010 0.1822046123 - - Disease resistance protein RPS5, putative [Ricinus communis]
14 Hb_002110_040 0.1854609479 - - hypothetical protein AMTR_s00135p00074190 [Amborella trichopoda]
15 Hb_005023_030 0.1857814505 - - PREDICTED: uncharacterized protein LOC103417254 [Malus domestica]
16 Hb_000933_060 0.1867631247 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005333_190 0.1870588752 - - PREDICTED: AP-4 complex subunit mu isoform X2 [Populus euphratica]
18 Hb_030328_010 0.1881334211 - - hypothetical protein CICLE_v10015936mg [Citrus clementina]
19 Hb_026228_020 0.1885083023 - - PREDICTED: uncharacterized protein LOC105632747 [Jatropha curcas]
20 Hb_181328_010 0.1891586677 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_081517_010 Hb_081517_010 Hb_013358_080 Hb_013358_080 Hb_081517_010--Hb_013358_080 Hb_001386_140 Hb_001386_140 Hb_081517_010--Hb_001386_140 Hb_115477_010 Hb_115477_010 Hb_081517_010--Hb_115477_010 Hb_007333_040 Hb_007333_040 Hb_081517_010--Hb_007333_040 Hb_115107_010 Hb_115107_010 Hb_081517_010--Hb_115107_010 Hb_003633_040 Hb_003633_040 Hb_081517_010--Hb_003633_040 Hb_013358_090 Hb_013358_090 Hb_013358_080--Hb_013358_090 Hb_181328_010 Hb_181328_010 Hb_013358_080--Hb_181328_010 Hb_001948_130 Hb_001948_130 Hb_013358_080--Hb_001948_130 Hb_111973_010 Hb_111973_010 Hb_013358_080--Hb_111973_010 Hb_074197_020 Hb_074197_020 Hb_013358_080--Hb_074197_020 Hb_010565_010 Hb_010565_010 Hb_001386_140--Hb_010565_010 Hb_005023_030 Hb_005023_030 Hb_001386_140--Hb_005023_030 Hb_006663_090 Hb_006663_090 Hb_001386_140--Hb_006663_090 Hb_002067_120 Hb_002067_120 Hb_001386_140--Hb_002067_120 Hb_001386_140--Hb_115477_010 Hb_054586_020 Hb_054586_020 Hb_001386_140--Hb_054586_020 Hb_115477_010--Hb_115107_010 Hb_168973_010 Hb_168973_010 Hb_115477_010--Hb_168973_010 Hb_115477_010--Hb_006663_090 Hb_007026_040 Hb_007026_040 Hb_115477_010--Hb_007026_040 Hb_115477_010--Hb_010565_010 Hb_033385_010 Hb_033385_010 Hb_007333_040--Hb_033385_010 Hb_106415_010 Hb_106415_010 Hb_007333_040--Hb_106415_010 Hb_009119_020 Hb_009119_020 Hb_007333_040--Hb_009119_020 Hb_007333_040--Hb_054586_020 Hb_007333_040--Hb_181328_010 Hb_019053_010 Hb_019053_010 Hb_007333_040--Hb_019053_010 Hb_002110_040 Hb_002110_040 Hb_115107_010--Hb_002110_040 Hb_009529_040 Hb_009529_040 Hb_115107_010--Hb_009529_040 Hb_115107_010--Hb_007026_040 Hb_001135_140 Hb_001135_140 Hb_115107_010--Hb_001135_140 Hb_115107_010--Hb_168973_010 Hb_003633_040--Hb_115107_010 Hb_076875_020 Hb_076875_020 Hb_003633_040--Hb_076875_020 Hb_003633_040--Hb_002110_040 Hb_003633_040--Hb_115477_010 Hb_003633_040--Hb_019053_010 Hb_000850_040 Hb_000850_040 Hb_003633_040--Hb_000850_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.1371 18.8395 7.26122 57.4625 13.1808 78.8896
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.73397 4.91944 26.9112 16.9539 14.3274

CAGE analysis