Hb_091367_010

Information

Type -
Description -
Location Contig91367: 1147-1599
Sequence    

Annotation

kegg
ID pop:POPTR_0013s14640g
description POPTRDRAFT_571830; hypothetical protein
nr
ID KDP26871.1
description hypothetical protein JCGZ_18029 [Jatropha curcas]
swissprot
ID Q9LQ14
description Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2
trembl
ID A0A067JSD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18029 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091367_010 0.0 - - hypothetical protein JCGZ_18029 [Jatropha curcas]
2 Hb_000167_160 0.3279874837 - - -
3 Hb_002118_040 0.3410875487 - - PREDICTED: uncharacterized protein LOC104727990 [Camelina sativa]
4 Hb_000042_190 0.3585404959 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005389_130 0.3782950941 - - hypothetical protein CICLE_v10009852mg [Citrus clementina]
6 Hb_011056_020 0.3953221229 transcription factor TF Family: ERF AP2 domain transcription factor RAP2.3, putative [Ricinus communis]
7 Hb_132303_010 0.4011964566 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
8 Hb_012654_030 0.4129371506 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000116_420 0.4154002744 - - PREDICTED: monosaccharide-sensing protein 2-like [Jatropha curcas]
10 Hb_000029_270 0.4162253167 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]
11 Hb_007747_140 0.4183739715 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
12 Hb_001994_010 0.4192337779 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
13 Hb_006938_070 0.4225013708 - - PREDICTED: uncharacterized protein LOC104893877 [Beta vulgaris subsp. vulgaris]
14 Hb_000222_030 0.4230053072 - - -
15 Hb_131060_010 0.4257668942 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
16 Hb_000733_130 0.4332684804 - - PREDICTED: cucumisin [Vitis vinifera]
17 Hb_004225_150 0.4342265379 transcription factor TF Family: C3H PREDICTED: zinc finger protein 36, C3H1 type-like 3 [Jatropha curcas]
18 Hb_015836_010 0.4343588152 - - -
19 Hb_000375_340 0.4352352119 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Populus euphratica]
20 Hb_001304_100 0.4364893776 - - -

Gene co-expression network

sample Hb_091367_010 Hb_091367_010 Hb_000167_160 Hb_000167_160 Hb_091367_010--Hb_000167_160 Hb_002118_040 Hb_002118_040 Hb_091367_010--Hb_002118_040 Hb_000042_190 Hb_000042_190 Hb_091367_010--Hb_000042_190 Hb_005389_130 Hb_005389_130 Hb_091367_010--Hb_005389_130 Hb_011056_020 Hb_011056_020 Hb_091367_010--Hb_011056_020 Hb_132303_010 Hb_132303_010 Hb_091367_010--Hb_132303_010 Hb_065378_010 Hb_065378_010 Hb_000167_160--Hb_065378_010 Hb_014549_020 Hb_014549_020 Hb_000167_160--Hb_014549_020 Hb_005214_130 Hb_005214_130 Hb_000167_160--Hb_005214_130 Hb_029920_040 Hb_029920_040 Hb_000167_160--Hb_029920_040 Hb_001150_030 Hb_001150_030 Hb_000167_160--Hb_001150_030 Hb_105712_010 Hb_105712_010 Hb_000167_160--Hb_105712_010 Hb_001190_090 Hb_001190_090 Hb_002118_040--Hb_001190_090 Hb_002118_040--Hb_000042_190 Hb_000733_130 Hb_000733_130 Hb_002118_040--Hb_000733_130 Hb_103604_010 Hb_103604_010 Hb_002118_040--Hb_103604_010 Hb_006586_010 Hb_006586_010 Hb_002118_040--Hb_006586_010 Hb_052983_010 Hb_052983_010 Hb_002118_040--Hb_052983_010 Hb_000042_190--Hb_052983_010 Hb_001930_020 Hb_001930_020 Hb_000042_190--Hb_001930_020 Hb_002357_050 Hb_002357_050 Hb_000042_190--Hb_002357_050 Hb_005357_090 Hb_005357_090 Hb_000042_190--Hb_005357_090 Hb_124518_010 Hb_124518_010 Hb_000042_190--Hb_124518_010 Hb_005078_030 Hb_005078_030 Hb_000042_190--Hb_005078_030 Hb_001994_010 Hb_001994_010 Hb_005389_130--Hb_001994_010 Hb_074683_010 Hb_074683_010 Hb_005389_130--Hb_074683_010 Hb_002027_370 Hb_002027_370 Hb_005389_130--Hb_002027_370 Hb_017214_050 Hb_017214_050 Hb_005389_130--Hb_017214_050 Hb_015836_010 Hb_015836_010 Hb_005389_130--Hb_015836_010 Hb_012654_030 Hb_012654_030 Hb_005389_130--Hb_012654_030 Hb_004328_040 Hb_004328_040 Hb_011056_020--Hb_004328_040 Hb_007747_140 Hb_007747_140 Hb_011056_020--Hb_007747_140 Hb_001014_120 Hb_001014_120 Hb_011056_020--Hb_001014_120 Hb_001004_110 Hb_001004_110 Hb_011056_020--Hb_001004_110 Hb_010480_030 Hb_010480_030 Hb_011056_020--Hb_010480_030 Hb_024468_020 Hb_024468_020 Hb_011056_020--Hb_024468_020 Hb_186982_010 Hb_186982_010 Hb_132303_010--Hb_186982_010 Hb_013925_010 Hb_013925_010 Hb_132303_010--Hb_013925_010 Hb_000029_270 Hb_000029_270 Hb_132303_010--Hb_000029_270 Hb_132303_010--Hb_001014_120 Hb_004048_060 Hb_004048_060 Hb_132303_010--Hb_004048_060 Hb_008516_020 Hb_008516_020 Hb_132303_010--Hb_008516_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.260792 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.124621 0.206475 0.261826 0

CAGE analysis