Hb_132303_010

Information

Type -
Description -
Location Contig132303: 551-1607
Sequence    

Annotation

kegg
ID sly:104646181
description uncharacterized LOC104646181
nr
ID XP_012075160.1
description PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061DPQ5
description Uncharacterized protein OS=Theobroma cacao GN=TCM_003164 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132303_010 0.0 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
2 Hb_186982_010 0.2777110531 - - PREDICTED: uncharacterized protein LOC104120222 [Nicotiana tomentosiformis]
3 Hb_013925_010 0.2807060785 - - RecName: Full=Pro-hevein; AltName: Full=Major hevein; Contains: RecName: Full=Hevein; AltName: Allergen=Hev b 6; Contains: RecName: Full=Win-like protein; Flags: Precursor [Hevea brasiliensis]
4 Hb_000029_270 0.304599076 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]
5 Hb_001014_120 0.3053957303 transcription factor TF Family: ERF ethylene-responsive transcription factor ERF113 [Jatropha curcas]
6 Hb_004048_060 0.3088269355 - - hypothetical protein PRUPE_ppa023788mg, partial [Prunus persica]
7 Hb_008516_020 0.3225387643 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
8 Hb_000421_190 0.3255700572 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000866_150 0.3266033002 - - -
10 Hb_007753_010 0.326613508 - - -
11 Hb_001005_070 0.3268407857 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]
12 Hb_000951_040 0.3317099522 transcription factor TF Family: M-type hypothetical protein JCGZ_09931 [Jatropha curcas]
13 Hb_070926_010 0.333113707 - - PREDICTED: mRNA-decapping enzyme subunit 2-like [Populus euphratica]
14 Hb_002118_040 0.3354746887 - - PREDICTED: uncharacterized protein LOC104727990 [Camelina sativa]
15 Hb_001766_100 0.3427716209 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_135624_010 0.3430040067 - - PREDICTED: inositol transporter 4-like [Jatropha curcas]
17 Hb_003747_130 0.3434255066 - - -
18 Hb_001195_390 0.3464112324 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
19 Hb_000392_330 0.3491912902 - - PREDICTED: protein kinase 2B, chloroplastic-like [Jatropha curcas]
20 Hb_003752_050 0.3503940361 - - hypothetical protein JCGZ_15078 [Jatropha curcas]

Gene co-expression network

sample Hb_132303_010 Hb_132303_010 Hb_186982_010 Hb_186982_010 Hb_132303_010--Hb_186982_010 Hb_013925_010 Hb_013925_010 Hb_132303_010--Hb_013925_010 Hb_000029_270 Hb_000029_270 Hb_132303_010--Hb_000029_270 Hb_001014_120 Hb_001014_120 Hb_132303_010--Hb_001014_120 Hb_004048_060 Hb_004048_060 Hb_132303_010--Hb_004048_060 Hb_008516_020 Hb_008516_020 Hb_132303_010--Hb_008516_020 Hb_007753_010 Hb_007753_010 Hb_186982_010--Hb_007753_010 Hb_070926_010 Hb_070926_010 Hb_186982_010--Hb_070926_010 Hb_001766_100 Hb_001766_100 Hb_186982_010--Hb_001766_100 Hb_000951_040 Hb_000951_040 Hb_186982_010--Hb_000951_040 Hb_000948_100 Hb_000948_100 Hb_186982_010--Hb_000948_100 Hb_116681_010 Hb_116681_010 Hb_013925_010--Hb_116681_010 Hb_001195_390 Hb_001195_390 Hb_013925_010--Hb_001195_390 Hb_001425_120 Hb_001425_120 Hb_013925_010--Hb_001425_120 Hb_130788_010 Hb_130788_010 Hb_013925_010--Hb_130788_010 Hb_002243_040 Hb_002243_040 Hb_013925_010--Hb_002243_040 Hb_007753_020 Hb_007753_020 Hb_013925_010--Hb_007753_020 Hb_000123_110 Hb_000123_110 Hb_000029_270--Hb_000123_110 Hb_000127_020 Hb_000127_020 Hb_000029_270--Hb_000127_020 Hb_005867_040 Hb_005867_040 Hb_000029_270--Hb_005867_040 Hb_010589_110 Hb_010589_110 Hb_000029_270--Hb_010589_110 Hb_000107_650 Hb_000107_650 Hb_000029_270--Hb_000107_650 Hb_000029_270--Hb_001766_100 Hb_001767_090 Hb_001767_090 Hb_001014_120--Hb_001767_090 Hb_011056_020 Hb_011056_020 Hb_001014_120--Hb_011056_020 Hb_001005_070 Hb_001005_070 Hb_001014_120--Hb_001005_070 Hb_001184_110 Hb_001184_110 Hb_001014_120--Hb_001184_110 Hb_002391_230 Hb_002391_230 Hb_001014_120--Hb_002391_230 Hb_112399_010 Hb_112399_010 Hb_001014_120--Hb_112399_010 Hb_014497_110 Hb_014497_110 Hb_004048_060--Hb_014497_110 Hb_000392_330 Hb_000392_330 Hb_004048_060--Hb_000392_330 Hb_004048_060--Hb_008516_020 Hb_002983_030 Hb_002983_030 Hb_004048_060--Hb_002983_030 Hb_000723_160 Hb_000723_160 Hb_004048_060--Hb_000723_160 Hb_004048_060--Hb_001005_070 Hb_008516_020--Hb_000392_330 Hb_003086_130 Hb_003086_130 Hb_008516_020--Hb_003086_130 Hb_091433_040 Hb_091433_040 Hb_008516_020--Hb_091433_040 Hb_001534_170 Hb_001534_170 Hb_008516_020--Hb_001534_170 Hb_008516_020--Hb_000951_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0456539 0 0 0 0 0.04023
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0411365 0.0755888 0.0165532 0

CAGE analysis