Hb_007753_010

Information

Type -
Description -
Location Contig7753: 12811-14668
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007753_010 0.0 - - -
2 Hb_000951_040 0.165493782 transcription factor TF Family: M-type hypothetical protein JCGZ_09931 [Jatropha curcas]
3 Hb_001005_070 0.2039633187 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]
4 Hb_004871_050 0.2107376259 - - hypothetical protein F383_22684 [Gossypium arboreum]
5 Hb_186982_010 0.2121430002 - - PREDICTED: uncharacterized protein LOC104120222 [Nicotiana tomentosiformis]
6 Hb_002739_110 0.2131757231 - - PREDICTED: ribosomal RNA processing protein 1 homolog [Jatropha curcas]
7 Hb_011640_020 0.2136583818 - - hypothetical protein VITISV_036432 [Vitis vinifera]
8 Hb_001396_230 0.2140818185 - - hypothetical protein MIMGU_mgv1a023992mg, partial [Erythranthe guttata]
9 Hb_001100_010 0.2260360809 - - F-box/FBD/LRR-repeat protein [Medicago truncatula]
10 Hb_000567_250 0.2264994818 - - hypothetical protein B456_009G162000 [Gossypium raimondii]
11 Hb_001616_120 0.234053195 - - -
12 Hb_000387_100 0.2365702128 - - -
13 Hb_001766_100 0.2382751648 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
14 Hb_000249_130 0.2399626299 - - hypothetical protein RCOM_0254640 [Ricinus communis]
15 Hb_003030_080 0.2431331788 - - multidrug resistance pump, putative [Ricinus communis]
16 Hb_000380_180 0.2439931342 - - kinase, putative [Ricinus communis]
17 Hb_000690_070 0.2458747376 - - -
18 Hb_000157_010 0.2468769522 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
19 Hb_001004_040 0.2480042972 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002400_090 0.2494363036 - - -

Gene co-expression network

sample Hb_007753_010 Hb_007753_010 Hb_000951_040 Hb_000951_040 Hb_007753_010--Hb_000951_040 Hb_001005_070 Hb_001005_070 Hb_007753_010--Hb_001005_070 Hb_004871_050 Hb_004871_050 Hb_007753_010--Hb_004871_050 Hb_186982_010 Hb_186982_010 Hb_007753_010--Hb_186982_010 Hb_002739_110 Hb_002739_110 Hb_007753_010--Hb_002739_110 Hb_011640_020 Hb_011640_020 Hb_007753_010--Hb_011640_020 Hb_000421_190 Hb_000421_190 Hb_000951_040--Hb_000421_190 Hb_000951_040--Hb_004871_050 Hb_001396_230 Hb_001396_230 Hb_000951_040--Hb_001396_230 Hb_008516_020 Hb_008516_020 Hb_000951_040--Hb_008516_020 Hb_001153_220 Hb_001153_220 Hb_000951_040--Hb_001153_220 Hb_006816_450 Hb_006816_450 Hb_001005_070--Hb_006816_450 Hb_003096_030 Hb_003096_030 Hb_001005_070--Hb_003096_030 Hb_000723_160 Hb_000723_160 Hb_001005_070--Hb_000723_160 Hb_001538_140 Hb_001538_140 Hb_001005_070--Hb_001538_140 Hb_014549_020 Hb_014549_020 Hb_001005_070--Hb_014549_020 Hb_000972_010 Hb_000972_010 Hb_004871_050--Hb_000972_010 Hb_000120_650 Hb_000120_650 Hb_004871_050--Hb_000120_650 Hb_000249_130 Hb_000249_130 Hb_004871_050--Hb_000249_130 Hb_017124_020 Hb_017124_020 Hb_004871_050--Hb_017124_020 Hb_000120_120 Hb_000120_120 Hb_004871_050--Hb_000120_120 Hb_001268_400 Hb_001268_400 Hb_004871_050--Hb_001268_400 Hb_132303_010 Hb_132303_010 Hb_186982_010--Hb_132303_010 Hb_070926_010 Hb_070926_010 Hb_186982_010--Hb_070926_010 Hb_001766_100 Hb_001766_100 Hb_186982_010--Hb_001766_100 Hb_186982_010--Hb_000951_040 Hb_000948_100 Hb_000948_100 Hb_186982_010--Hb_000948_100 Hb_002739_110--Hb_001396_230 Hb_001004_040 Hb_001004_040 Hb_002739_110--Hb_001004_040 Hb_000380_180 Hb_000380_180 Hb_002739_110--Hb_000380_180 Hb_152439_020 Hb_152439_020 Hb_002739_110--Hb_152439_020 Hb_002739_110--Hb_000249_130 Hb_008085_040 Hb_008085_040 Hb_002739_110--Hb_008085_040 Hb_006198_050 Hb_006198_050 Hb_011640_020--Hb_006198_050 Hb_000457_160 Hb_000457_160 Hb_011640_020--Hb_000457_160 Hb_011640_020--Hb_000380_180 Hb_103873_010 Hb_103873_010 Hb_011640_020--Hb_103873_010 Hb_000907_100 Hb_000907_100 Hb_011640_020--Hb_000907_100 Hb_006602_010 Hb_006602_010 Hb_011640_020--Hb_006602_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.48004 0.0651174 0 0 5.13012 19.5227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.6029 8.06837 37.0614 9.00886 0

CAGE analysis