Hb_070926_010

Information

Type -
Description -
Location Contig70926: 255-3919
Sequence    

Annotation

kegg
ID pop:POPTR_0008s03940g
description POPTRDRAFT_563741; MutT/nudix family protein
nr
ID XP_011041004.1
description PREDICTED: mRNA-decapping enzyme subunit 2-like [Populus euphratica]
swissprot
ID -
description -
trembl
ID B9HLL2
description MutT/nudix family protein OS=Populus trichocarpa GN=POPTR_0008s03940g PE=4 SV=1
Gene Ontology
ID GO:0005488
description mrna-decapping enzyme subunit 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_070926_010 0.0 - - PREDICTED: mRNA-decapping enzyme subunit 2-like [Populus euphratica]
2 Hb_000866_150 0.2145568558 - - -
3 Hb_128558_010 0.2504875512 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_001766_100 0.261048156 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_003069_020 0.2658710356 - - conserved hypothetical protein [Ricinus communis]
6 Hb_096225_020 0.2664519783 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]
7 Hb_011909_040 0.275639554 - - hypothetical protein JCGZ_00750 [Jatropha curcas]
8 Hb_000270_320 0.2772467473 - - hypothetical protein RCOM_1512920 [Ricinus communis]
9 Hb_000832_230 0.2792868337 transcription factor TF Family: C2H2 hypothetical protein JCGZ_18434 [Jatropha curcas]
10 Hb_186982_010 0.2793661083 - - PREDICTED: uncharacterized protein LOC104120222 [Nicotiana tomentosiformis]
11 Hb_004324_350 0.2839914901 - - PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]
12 Hb_001488_100 0.2893376806 - - -
13 Hb_010417_020 0.2904299257 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
14 Hb_000340_430 0.2910745748 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_011457_170 0.2968761646 - - PREDICTED: chlorophyllase-1-like [Jatropha curcas]
16 Hb_002983_030 0.2971594032 desease resistance Gene Name: NB-ARC hypothetical protein CISIN_1g046124mg, partial [Citrus sinensis]
17 Hb_003688_080 0.3010455807 - - -
18 Hb_004453_140 0.3034392097 - - PREDICTED: uncharacterized protein LOC104880181 [Vitis vinifera]
19 Hb_002301_320 0.3049965702 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0004s04590g [Populus trichocarpa]
20 Hb_000483_420 0.308598578 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]

Gene co-expression network

sample Hb_070926_010 Hb_070926_010 Hb_000866_150 Hb_000866_150 Hb_070926_010--Hb_000866_150 Hb_128558_010 Hb_128558_010 Hb_070926_010--Hb_128558_010 Hb_001766_100 Hb_001766_100 Hb_070926_010--Hb_001766_100 Hb_003069_020 Hb_003069_020 Hb_070926_010--Hb_003069_020 Hb_096225_020 Hb_096225_020 Hb_070926_010--Hb_096225_020 Hb_011909_040 Hb_011909_040 Hb_070926_010--Hb_011909_040 Hb_000866_150--Hb_128558_010 Hb_000483_420 Hb_000483_420 Hb_000866_150--Hb_000483_420 Hb_003747_130 Hb_003747_130 Hb_000866_150--Hb_003747_130 Hb_165666_010 Hb_165666_010 Hb_000866_150--Hb_165666_010 Hb_004324_350 Hb_004324_350 Hb_000866_150--Hb_004324_350 Hb_002609_180 Hb_002609_180 Hb_128558_010--Hb_002609_180 Hb_000421_190 Hb_000421_190 Hb_128558_010--Hb_000421_190 Hb_128558_010--Hb_096225_020 Hb_000816_110 Hb_000816_110 Hb_128558_010--Hb_000816_110 Hb_002983_030 Hb_002983_030 Hb_001766_100--Hb_002983_030 Hb_014549_020 Hb_014549_020 Hb_001766_100--Hb_014549_020 Hb_000193_240 Hb_000193_240 Hb_001766_100--Hb_000193_240 Hb_004453_140 Hb_004453_140 Hb_001766_100--Hb_004453_140 Hb_152439_020 Hb_152439_020 Hb_001766_100--Hb_152439_020 Hb_001100_010 Hb_001100_010 Hb_001766_100--Hb_001100_010 Hb_000331_150 Hb_000331_150 Hb_003069_020--Hb_000331_150 Hb_000590_040 Hb_000590_040 Hb_003069_020--Hb_000590_040 Hb_003069_020--Hb_004324_350 Hb_003069_020--Hb_001766_100 Hb_000684_370 Hb_000684_370 Hb_003069_020--Hb_000684_370 Hb_096225_020--Hb_002983_030 Hb_005396_080 Hb_005396_080 Hb_096225_020--Hb_005396_080 Hb_000340_430 Hb_000340_430 Hb_096225_020--Hb_000340_430 Hb_005298_010 Hb_005298_010 Hb_096225_020--Hb_005298_010 Hb_096225_020--Hb_004453_140 Hb_005867_040 Hb_005867_040 Hb_096225_020--Hb_005867_040 Hb_001488_100 Hb_001488_100 Hb_011909_040--Hb_001488_100 Hb_011909_040--Hb_000340_430 Hb_002007_270 Hb_002007_270 Hb_011909_040--Hb_002007_270 Hb_001999_060 Hb_001999_060 Hb_011909_040--Hb_001999_060 Hb_000789_190 Hb_000789_190 Hb_011909_040--Hb_000789_190 Hb_000193_250 Hb_000193_250 Hb_011909_040--Hb_000193_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0648447 0 0 0 0.102471 0.0850408
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.186396 0.160233 0.0384928 0

CAGE analysis