Hb_000866_150

Information

Type -
Description -
Location Contig866: 133019-134019
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_150 0.0 - - -
2 Hb_070926_010 0.2145568558 - - PREDICTED: mRNA-decapping enzyme subunit 2-like [Populus euphratica]
3 Hb_128558_010 0.2243284343 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_000483_420 0.2271362915 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
5 Hb_003747_130 0.236146424 - - -
6 Hb_165666_010 0.2625767923 - - -
7 Hb_004324_350 0.2868244592 - - PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]
8 Hb_002301_320 0.2896549973 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0004s04590g [Populus trichocarpa]
9 Hb_000421_190 0.2916243523 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001488_100 0.2954770003 - - -
11 Hb_000789_190 0.3087233163 transcription factor TF Family: NAC hypothetical protein JCGZ_07342 [Jatropha curcas]
12 Hb_002248_050 0.3097123453 - - PREDICTED: uncharacterized protein LOC105635697 [Jatropha curcas]
13 Hb_002843_160 0.3116689712 - - PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR1 [Jatropha curcas]
14 Hb_011909_040 0.3121157126 - - hypothetical protein JCGZ_00750 [Jatropha curcas]
15 Hb_003069_020 0.3123987715 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002835_170 0.3135204385 - - PREDICTED: uncharacterized protein LOC105640307 [Jatropha curcas]
17 Hb_001766_100 0.3140366363 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_000951_060 0.3148128705 - - mads box protein, putative [Ricinus communis]
19 Hb_000816_110 0.3150056544 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Jatropha curcas]
20 Hb_000340_430 0.3186086388 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000866_150 Hb_000866_150 Hb_070926_010 Hb_070926_010 Hb_000866_150--Hb_070926_010 Hb_128558_010 Hb_128558_010 Hb_000866_150--Hb_128558_010 Hb_000483_420 Hb_000483_420 Hb_000866_150--Hb_000483_420 Hb_003747_130 Hb_003747_130 Hb_000866_150--Hb_003747_130 Hb_165666_010 Hb_165666_010 Hb_000866_150--Hb_165666_010 Hb_004324_350 Hb_004324_350 Hb_000866_150--Hb_004324_350 Hb_070926_010--Hb_128558_010 Hb_001766_100 Hb_001766_100 Hb_070926_010--Hb_001766_100 Hb_003069_020 Hb_003069_020 Hb_070926_010--Hb_003069_020 Hb_096225_020 Hb_096225_020 Hb_070926_010--Hb_096225_020 Hb_011909_040 Hb_011909_040 Hb_070926_010--Hb_011909_040 Hb_002609_180 Hb_002609_180 Hb_128558_010--Hb_002609_180 Hb_000421_190 Hb_000421_190 Hb_128558_010--Hb_000421_190 Hb_128558_010--Hb_096225_020 Hb_000816_110 Hb_000816_110 Hb_128558_010--Hb_000816_110 Hb_000576_040 Hb_000576_040 Hb_000483_420--Hb_000576_040 Hb_002739_110 Hb_002739_110 Hb_000483_420--Hb_002739_110 Hb_152439_020 Hb_152439_020 Hb_000483_420--Hb_152439_020 Hb_000193_250 Hb_000193_250 Hb_000483_420--Hb_000193_250 Hb_000483_420--Hb_004324_350 Hb_000249_130 Hb_000249_130 Hb_000483_420--Hb_000249_130 Hb_003540_130 Hb_003540_130 Hb_003747_130--Hb_003540_130 Hb_002843_160 Hb_002843_160 Hb_003747_130--Hb_002843_160 Hb_002243_040 Hb_002243_040 Hb_003747_130--Hb_002243_040 Hb_003747_130--Hb_000483_420 Hb_003073_130 Hb_003073_130 Hb_003747_130--Hb_003073_130 Hb_004195_250 Hb_004195_250 Hb_165666_010--Hb_004195_250 Hb_000368_080 Hb_000368_080 Hb_165666_010--Hb_000368_080 Hb_001304_100 Hb_001304_100 Hb_165666_010--Hb_001304_100 Hb_003688_080 Hb_003688_080 Hb_165666_010--Hb_003688_080 Hb_001141_480 Hb_001141_480 Hb_165666_010--Hb_001141_480 Hb_000380_180 Hb_000380_180 Hb_004324_350--Hb_000380_180 Hb_001488_100 Hb_001488_100 Hb_004324_350--Hb_001488_100 Hb_001767_010 Hb_001767_010 Hb_004324_350--Hb_001767_010 Hb_002498_060 Hb_002498_060 Hb_004324_350--Hb_002498_060 Hb_004324_350--Hb_002739_110 Hb_004324_350--Hb_000249_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.306008 0 0 0 0.203928 0.20941
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.392539 0.525418 0 0

CAGE analysis