Hb_001304_100

Information

Type -
Description -
Location Contig1304: 179297-180597
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001304_100 0.0 - - -
2 Hb_165666_010 0.267283692 - - -
3 Hb_143397_010 0.2687269279 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
4 Hb_003688_080 0.3099025793 - - -
5 Hb_001892_120 0.3225899649 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]
6 Hb_010232_010 0.3303639646 - - -
7 Hb_070926_010 0.3314890957 - - PREDICTED: mRNA-decapping enzyme subunit 2-like [Populus euphratica]
8 Hb_000368_080 0.3371306398 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
9 Hb_010098_070 0.3401853565 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000866_150 0.3424673113 - - -
11 Hb_032533_010 0.3456790313 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
12 Hb_003687_180 0.3460761923 - - hypothetical protein JCGZ_02335 [Jatropha curcas]
13 Hb_003069_020 0.3541926144 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002820_140 0.3573067657 - - PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]
15 Hb_015974_010 0.3652996998 - - endonuclease/exonuclease/phosphatase family protein [Medicago truncatula]
16 Hb_007810_050 0.3683241923 - - protein with unknown function [Ricinus communis]
17 Hb_001811_010 0.372899092 - - -
18 Hb_001541_240 0.3763366279 - - conserved hypothetical protein [Ricinus communis]
19 Hb_113951_010 0.3764534793 - - hypothetical protein JCGZ_06358 [Jatropha curcas]
20 Hb_000029_270 0.3771325399 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]

Gene co-expression network

sample Hb_001304_100 Hb_001304_100 Hb_165666_010 Hb_165666_010 Hb_001304_100--Hb_165666_010 Hb_143397_010 Hb_143397_010 Hb_001304_100--Hb_143397_010 Hb_003688_080 Hb_003688_080 Hb_001304_100--Hb_003688_080 Hb_001892_120 Hb_001892_120 Hb_001304_100--Hb_001892_120 Hb_010232_010 Hb_010232_010 Hb_001304_100--Hb_010232_010 Hb_070926_010 Hb_070926_010 Hb_001304_100--Hb_070926_010 Hb_004195_250 Hb_004195_250 Hb_165666_010--Hb_004195_250 Hb_000368_080 Hb_000368_080 Hb_165666_010--Hb_000368_080 Hb_000866_150 Hb_000866_150 Hb_165666_010--Hb_000866_150 Hb_165666_010--Hb_003688_080 Hb_001141_480 Hb_001141_480 Hb_165666_010--Hb_001141_480 Hb_008707_030 Hb_008707_030 Hb_143397_010--Hb_008707_030 Hb_001902_020 Hb_001902_020 Hb_143397_010--Hb_001902_020 Hb_104812_030 Hb_104812_030 Hb_143397_010--Hb_104812_030 Hb_007810_050 Hb_007810_050 Hb_143397_010--Hb_007810_050 Hb_032264_130 Hb_032264_130 Hb_143397_010--Hb_032264_130 Hb_003688_080--Hb_001141_480 Hb_000352_180 Hb_000352_180 Hb_003688_080--Hb_000352_180 Hb_003688_080--Hb_000368_080 Hb_000832_230 Hb_000832_230 Hb_003688_080--Hb_000832_230 Hb_000249_120 Hb_000249_120 Hb_003688_080--Hb_000249_120 Hb_002820_140 Hb_002820_140 Hb_001892_120--Hb_002820_140 Hb_002099_050 Hb_002099_050 Hb_001892_120--Hb_002099_050 Hb_001279_130 Hb_001279_130 Hb_001892_120--Hb_001279_130 Hb_000699_120 Hb_000699_120 Hb_001892_120--Hb_000699_120 Hb_000638_020 Hb_000638_020 Hb_001892_120--Hb_000638_020 Hb_002260_090 Hb_002260_090 Hb_001892_120--Hb_002260_090 Hb_032533_010 Hb_032533_010 Hb_010232_010--Hb_032533_010 Hb_003687_180 Hb_003687_180 Hb_010232_010--Hb_003687_180 Hb_001541_240 Hb_001541_240 Hb_010232_010--Hb_001541_240 Hb_001055_040 Hb_001055_040 Hb_010232_010--Hb_001055_040 Hb_000721_020 Hb_000721_020 Hb_010232_010--Hb_000721_020 Hb_006045_060 Hb_006045_060 Hb_010232_010--Hb_006045_060 Hb_070926_010--Hb_000866_150 Hb_128558_010 Hb_128558_010 Hb_070926_010--Hb_128558_010 Hb_001766_100 Hb_001766_100 Hb_070926_010--Hb_001766_100 Hb_003069_020 Hb_003069_020 Hb_070926_010--Hb_003069_020 Hb_096225_020 Hb_096225_020 Hb_070926_010--Hb_096225_020 Hb_011909_040 Hb_011909_040 Hb_070926_010--Hb_011909_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.346082 0 0 0 0.193775 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.362654 0.201137 0.0506862 0

CAGE analysis