Hb_010232_010

Information

Type -
Description -
Location Contig10232: 12281-13070
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010232_010 0.0 - - -
2 Hb_032533_010 0.2640887113 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
3 Hb_003687_180 0.2649967326 - - hypothetical protein JCGZ_02335 [Jatropha curcas]
4 Hb_001541_240 0.2726190615 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001055_040 0.3100587686 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
6 Hb_000721_020 0.3176874472 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
7 Hb_006045_060 0.3227382819 - - PREDICTED: uncharacterized protein LOC104222982, partial [Nicotiana sylvestris]
8 Hb_001304_100 0.3303639646 - - -
9 Hb_015836_010 0.330432303 - - -
10 Hb_000326_020 0.3410538976 - - -
11 Hb_017214_050 0.3694389525 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_002027_370 0.3701134068 - - conserved hypothetical protein [Ricinus communis]
13 Hb_059924_010 0.3760297204 - - -
14 Hb_074683_010 0.376563335 - - -
15 Hb_005389_130 0.3811609676 - - hypothetical protein CICLE_v10009852mg [Citrus clementina]
16 Hb_012654_030 0.3856870176 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001935_210 0.3947933424 - - -
18 Hb_001994_010 0.3983191612 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_004696_050 0.3999432845 - - -
20 Hb_143397_010 0.4051361178 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]

Gene co-expression network

sample Hb_010232_010 Hb_010232_010 Hb_032533_010 Hb_032533_010 Hb_010232_010--Hb_032533_010 Hb_003687_180 Hb_003687_180 Hb_010232_010--Hb_003687_180 Hb_001541_240 Hb_001541_240 Hb_010232_010--Hb_001541_240 Hb_001055_040 Hb_001055_040 Hb_010232_010--Hb_001055_040 Hb_000721_020 Hb_000721_020 Hb_010232_010--Hb_000721_020 Hb_006045_060 Hb_006045_060 Hb_010232_010--Hb_006045_060 Hb_032533_010--Hb_003687_180 Hb_032533_010--Hb_000721_020 Hb_032533_010--Hb_006045_060 Hb_000326_020 Hb_000326_020 Hb_032533_010--Hb_000326_020 Hb_032533_010--Hb_001055_040 Hb_003687_180--Hb_001055_040 Hb_003687_180--Hb_000721_020 Hb_003687_180--Hb_006045_060 Hb_003687_180--Hb_000326_020 Hb_001541_240--Hb_000326_020 Hb_001541_240--Hb_032533_010 Hb_001541_240--Hb_000721_020 Hb_001541_240--Hb_003687_180 Hb_001541_240--Hb_006045_060 Hb_001902_020 Hb_001902_020 Hb_001055_040--Hb_001902_020 Hb_000926_220 Hb_000926_220 Hb_001055_040--Hb_000926_220 Hb_017836_010 Hb_017836_010 Hb_001055_040--Hb_017836_010 Hb_001055_040--Hb_000721_020 Hb_000721_020--Hb_006045_060 Hb_000721_020--Hb_000326_020 Hb_074152_010 Hb_074152_010 Hb_000721_020--Hb_074152_010 Hb_000917_250 Hb_000917_250 Hb_000721_020--Hb_000917_250 Hb_006045_060--Hb_000326_020 Hb_006045_060--Hb_074152_010 Hb_006045_060--Hb_000917_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.7183 0 0 0 0.862428 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.21429 0 0.560424 0

CAGE analysis