Hb_002609_180

Information

Type -
Description -
Location Contig2609: 137733-139162
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002609_180 0.0 - - -
2 Hb_128558_010 0.2687810891 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_000427_060 0.2918462085 - - -
4 Hb_000563_310 0.3152094777 transcription factor TF Family: ERF ethylene-responsive transcription factor 3 [Hevea brasiliensis]
5 Hb_017170_020 0.3279499897 - - PREDICTED: OPA3-like protein isoform X2 [Jatropha curcas]
6 Hb_012754_030 0.328915503 - - PREDICTED: uncharacterized protein LOC105633150 isoform X1 [Jatropha curcas]
7 Hb_000463_040 0.3291568284 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
8 Hb_002876_360 0.3326979847 - - ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
9 Hb_002200_120 0.3363750862 - - conserved hypothetical protein [Ricinus communis]
10 Hb_019762_010 0.3385224094 - - hypothetical protein JCGZ_12062 [Jatropha curcas]
11 Hb_000563_220 0.3397580442 - - hypothetical protein VITISV_004111 [Vitis vinifera]
12 Hb_000621_050 0.3447167275 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 1-like [Jatropha curcas]
13 Hb_004899_220 0.3530863624 - - PREDICTED: adrenodoxin-like protein 2, mitochondrial [Jatropha curcas]
14 Hb_070926_010 0.3536411442 - - PREDICTED: mRNA-decapping enzyme subunit 2-like [Populus euphratica]
15 Hb_004645_040 0.3550066015 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
16 Hb_000184_120 0.3553182272 - - hypothetical protein JCGZ_18526 [Jatropha curcas]
17 Hb_001821_120 0.3559381552 - - PREDICTED: uncharacterized protein LOC105643956 [Jatropha curcas]
18 Hb_052135_030 0.3561841296 - - PREDICTED: huntingtin-interacting protein K [Jatropha curcas]
19 Hb_003029_080 0.35675221 - - peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
20 Hb_143629_220 0.3575022214 - - PREDICTED: hydrophobic protein LTI6B [Phoenix dactylifera]

Gene co-expression network

sample Hb_002609_180 Hb_002609_180 Hb_128558_010 Hb_128558_010 Hb_002609_180--Hb_128558_010 Hb_000427_060 Hb_000427_060 Hb_002609_180--Hb_000427_060 Hb_000563_310 Hb_000563_310 Hb_002609_180--Hb_000563_310 Hb_017170_020 Hb_017170_020 Hb_002609_180--Hb_017170_020 Hb_012754_030 Hb_012754_030 Hb_002609_180--Hb_012754_030 Hb_000463_040 Hb_000463_040 Hb_002609_180--Hb_000463_040 Hb_000866_150 Hb_000866_150 Hb_128558_010--Hb_000866_150 Hb_070926_010 Hb_070926_010 Hb_128558_010--Hb_070926_010 Hb_000421_190 Hb_000421_190 Hb_128558_010--Hb_000421_190 Hb_096225_020 Hb_096225_020 Hb_128558_010--Hb_096225_020 Hb_000816_110 Hb_000816_110 Hb_128558_010--Hb_000816_110 Hb_002759_180 Hb_002759_180 Hb_000427_060--Hb_002759_180 Hb_047823_010 Hb_047823_010 Hb_000427_060--Hb_047823_010 Hb_001545_040 Hb_001545_040 Hb_000427_060--Hb_001545_040 Hb_000427_060--Hb_000563_310 Hb_000103_060 Hb_000103_060 Hb_000427_060--Hb_000103_060 Hb_002301_130 Hb_002301_130 Hb_000427_060--Hb_002301_130 Hb_002784_140 Hb_002784_140 Hb_000563_310--Hb_002784_140 Hb_000340_440 Hb_000340_440 Hb_000563_310--Hb_000340_440 Hb_005772_010 Hb_005772_010 Hb_000563_310--Hb_005772_010 Hb_003579_020 Hb_003579_020 Hb_000563_310--Hb_003579_020 Hb_000258_280 Hb_000258_280 Hb_000563_310--Hb_000258_280 Hb_009880_010 Hb_009880_010 Hb_000563_310--Hb_009880_010 Hb_004295_020 Hb_004295_020 Hb_017170_020--Hb_004295_020 Hb_000621_050 Hb_000621_050 Hb_017170_020--Hb_000621_050 Hb_052135_030 Hb_052135_030 Hb_017170_020--Hb_052135_030 Hb_002498_180 Hb_002498_180 Hb_017170_020--Hb_002498_180 Hb_003029_080 Hb_003029_080 Hb_017170_020--Hb_003029_080 Hb_001623_330 Hb_001623_330 Hb_017170_020--Hb_001623_330 Hb_012754_030--Hb_000563_310 Hb_003398_140 Hb_003398_140 Hb_012754_030--Hb_003398_140 Hb_012754_030--Hb_000340_440 Hb_028271_010 Hb_028271_010 Hb_012754_030--Hb_028271_010 Hb_009680_040 Hb_009680_040 Hb_012754_030--Hb_009680_040 Hb_026687_010 Hb_026687_010 Hb_012754_030--Hb_026687_010 Hb_002007_270 Hb_002007_270 Hb_000463_040--Hb_002007_270 Hb_000977_080 Hb_000977_080 Hb_000463_040--Hb_000977_080 Hb_000260_050 Hb_000260_050 Hb_000463_040--Hb_000260_050 Hb_007747_090 Hb_007747_090 Hb_000463_040--Hb_007747_090 Hb_000576_030 Hb_000576_030 Hb_000463_040--Hb_000576_030 Hb_005078_040 Hb_005078_040 Hb_000463_040--Hb_005078_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.157148 0.137226 0.132175 0 0.455266 0.499593
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.1679 0.236255 0 0

CAGE analysis