Hb_000621_050

Information

Type transcription factor
Description TF Family: bHLH
Location Contig621: 43126-45079
Sequence    

Annotation

kegg
ID pop:POPTR_0005s15590g
description hypothetical protein
nr
ID XP_012077982.1
description PREDICTED: transcription factor BEE 1-like [Jatropha curcas]
swissprot
ID A4D998
description Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1
trembl
ID A0A067K9P1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12987 PE=4 SV=1
Gene Ontology
ID GO:0046983
description transcription factor bee 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51508: 43204-45122
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000621_050 0.0 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 1-like [Jatropha curcas]
2 Hb_017170_020 0.1191694061 - - PREDICTED: OPA3-like protein isoform X2 [Jatropha curcas]
3 Hb_002200_120 0.1736717612 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000329_610 0.1825932331 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004295_020 0.1826839131 - - thioredoxin II-type 1 [Hevea brasiliensis]
6 Hb_000061_160 0.1870505517 - - PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Jatropha curcas]
7 Hb_180992_010 0.1888221963 - - hypothetical protein POPTR_0010s24060g [Populus trichocarpa]
8 Hb_000853_370 0.190932492 - - PREDICTED: uncharacterized protein LOC105642590 [Jatropha curcas]
9 Hb_052135_030 0.1912748397 - - PREDICTED: huntingtin-interacting protein K [Jatropha curcas]
10 Hb_002701_130 0.1936697182 transcription factor TF Family: MYB Myb domain protein 121 [Theobroma cacao]
11 Hb_001115_050 0.2007445317 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
12 Hb_030620_010 0.2040296348 - - -
13 Hb_001821_120 0.2041944493 - - PREDICTED: uncharacterized protein LOC105643956 [Jatropha curcas]
14 Hb_000345_560 0.2056552836 - - -
15 Hb_000463_040 0.2057144746 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
16 Hb_000330_170 0.2064174369 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein RF9 [Jatropha curcas]
17 Hb_033080_010 0.206493515 - - -
18 Hb_000977_140 0.2066263571 - - PREDICTED: uncharacterized protein LOC105801335 [Gossypium raimondii]
19 Hb_003786_110 0.2072639363 - - PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
20 Hb_000777_060 0.2080084578 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000621_050 Hb_000621_050 Hb_017170_020 Hb_017170_020 Hb_000621_050--Hb_017170_020 Hb_002200_120 Hb_002200_120 Hb_000621_050--Hb_002200_120 Hb_000329_610 Hb_000329_610 Hb_000621_050--Hb_000329_610 Hb_004295_020 Hb_004295_020 Hb_000621_050--Hb_004295_020 Hb_000061_160 Hb_000061_160 Hb_000621_050--Hb_000061_160 Hb_180992_010 Hb_180992_010 Hb_000621_050--Hb_180992_010 Hb_017170_020--Hb_004295_020 Hb_052135_030 Hb_052135_030 Hb_017170_020--Hb_052135_030 Hb_002498_180 Hb_002498_180 Hb_017170_020--Hb_002498_180 Hb_003029_080 Hb_003029_080 Hb_017170_020--Hb_003029_080 Hb_001623_330 Hb_001623_330 Hb_017170_020--Hb_001623_330 Hb_000184_120 Hb_000184_120 Hb_002200_120--Hb_000184_120 Hb_000330_170 Hb_000330_170 Hb_002200_120--Hb_000330_170 Hb_000563_530 Hb_000563_530 Hb_002200_120--Hb_000563_530 Hb_033448_010 Hb_033448_010 Hb_002200_120--Hb_033448_010 Hb_000369_090 Hb_000369_090 Hb_002200_120--Hb_000369_090 Hb_002200_120--Hb_000061_160 Hb_003786_110 Hb_003786_110 Hb_000329_610--Hb_003786_110 Hb_017134_040 Hb_017134_040 Hb_000329_610--Hb_017134_040 Hb_000853_370 Hb_000853_370 Hb_000329_610--Hb_000853_370 Hb_001504_170 Hb_001504_170 Hb_000329_610--Hb_001504_170 Hb_000329_610--Hb_180992_010 Hb_003507_020 Hb_003507_020 Hb_000329_610--Hb_003507_020 Hb_007992_030 Hb_007992_030 Hb_004295_020--Hb_007992_030 Hb_000847_070 Hb_000847_070 Hb_004295_020--Hb_000847_070 Hb_004223_230 Hb_004223_230 Hb_004295_020--Hb_004223_230 Hb_000045_130 Hb_000045_130 Hb_004295_020--Hb_000045_130 Hb_004295_020--Hb_052135_030 Hb_001104_120 Hb_001104_120 Hb_000061_160--Hb_001104_120 Hb_000777_060 Hb_000777_060 Hb_000061_160--Hb_000777_060 Hb_001621_180 Hb_001621_180 Hb_000061_160--Hb_001621_180 Hb_000563_590 Hb_000563_590 Hb_000061_160--Hb_000563_590 Hb_000032_260 Hb_000032_260 Hb_000061_160--Hb_000032_260 Hb_000061_160--Hb_000330_170 Hb_001220_040 Hb_001220_040 Hb_180992_010--Hb_001220_040 Hb_000933_140 Hb_000933_140 Hb_180992_010--Hb_000933_140 Hb_005348_080 Hb_005348_080 Hb_180992_010--Hb_005348_080 Hb_180992_010--Hb_004295_020 Hb_180992_010--Hb_000061_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
61.1523 1.16989 1.70617 9.11809 95.1536 64.9919
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.5553 112.407 21.0984 6.8733 2.10528

CAGE analysis