Hb_003786_110

Information

Type -
Description -
Location Contig3786: 166127-166629
Sequence    

Annotation

kegg
ID pop:POPTR_0005s13840g
description POPTRDRAFT_208371; hypothetical protein
nr
ID XP_012079119.1
description PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KHU8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12291 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 030_P13.ab1: 166014-166723

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003786_110 0.0 - - PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
2 Hb_000329_610 0.0904662255 - - conserved hypothetical protein [Ricinus communis]
3 Hb_017134_040 0.0955875686 - - hypothetical protein AALP_AA3G042000 [Arabis alpina]
4 Hb_001504_170 0.1042563585 - - plant poly(A)+ RNA export protein, putative [Ricinus communis]
5 Hb_007178_010 0.1049043048 - - pseudo-hevein [Hevea brasiliensis]
6 Hb_026048_090 0.1107382464 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002067_160 0.1125215826 - - Protein MLO, putative [Ricinus communis]
8 Hb_014067_010 0.113022051 - - hypothetical protein JCGZ_09524 [Jatropha curcas]
9 Hb_002200_110 0.1152984087 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003627_020 0.1192134856 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
11 Hb_000933_140 0.1205025299 - - PREDICTED: uncharacterized protein LOC105630501 [Jatropha curcas]
12 Hb_000853_370 0.1208411406 - - PREDICTED: uncharacterized protein LOC105642590 [Jatropha curcas]
13 Hb_002391_110 0.1208695793 - - PREDICTED: ribosomal L1 domain-containing protein 1-like [Jatropha curcas]
14 Hb_004126_010 0.1228017062 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
15 Hb_002232_180 0.1238117858 - - PREDICTED: DUF21 domain-containing protein At2g14520-like isoform X1 [Populus euphratica]
16 Hb_005488_100 0.1246888145 - - hypothetical protein JCGZ_00295 [Jatropha curcas]
17 Hb_001115_050 0.1258465315 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
18 Hb_005730_020 0.1261131522 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.1-like [Jatropha curcas]
19 Hb_001911_030 0.1264731722 - - PREDICTED: disease resistance RPP8-like protein 3 [Jatropha curcas]
20 Hb_013479_020 0.1276075801 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]

Gene co-expression network

sample Hb_003786_110 Hb_003786_110 Hb_000329_610 Hb_000329_610 Hb_003786_110--Hb_000329_610 Hb_017134_040 Hb_017134_040 Hb_003786_110--Hb_017134_040 Hb_001504_170 Hb_001504_170 Hb_003786_110--Hb_001504_170 Hb_007178_010 Hb_007178_010 Hb_003786_110--Hb_007178_010 Hb_026048_090 Hb_026048_090 Hb_003786_110--Hb_026048_090 Hb_002067_160 Hb_002067_160 Hb_003786_110--Hb_002067_160 Hb_000329_610--Hb_017134_040 Hb_000853_370 Hb_000853_370 Hb_000329_610--Hb_000853_370 Hb_000329_610--Hb_001504_170 Hb_180992_010 Hb_180992_010 Hb_000329_610--Hb_180992_010 Hb_003507_020 Hb_003507_020 Hb_000329_610--Hb_003507_020 Hb_005730_020 Hb_005730_020 Hb_017134_040--Hb_005730_020 Hb_002890_220 Hb_002890_220 Hb_017134_040--Hb_002890_220 Hb_017134_040--Hb_007178_010 Hb_005063_010 Hb_005063_010 Hb_017134_040--Hb_005063_010 Hb_013479_020 Hb_013479_020 Hb_001504_170--Hb_013479_020 Hb_002942_030 Hb_002942_030 Hb_001504_170--Hb_002942_030 Hb_002955_030 Hb_002955_030 Hb_001504_170--Hb_002955_030 Hb_000345_560 Hb_000345_560 Hb_001504_170--Hb_000345_560 Hb_002232_180 Hb_002232_180 Hb_007178_010--Hb_002232_180 Hb_007810_040 Hb_007810_040 Hb_007178_010--Hb_007810_040 Hb_007178_010--Hb_002067_160 Hb_005488_100 Hb_005488_100 Hb_007178_010--Hb_005488_100 Hb_003906_110 Hb_003906_110 Hb_007178_010--Hb_003906_110 Hb_010931_100 Hb_010931_100 Hb_007178_010--Hb_010931_100 Hb_009510_030 Hb_009510_030 Hb_026048_090--Hb_009510_030 Hb_127979_010 Hb_127979_010 Hb_026048_090--Hb_127979_010 Hb_000771_140 Hb_000771_140 Hb_026048_090--Hb_000771_140 Hb_000057_060 Hb_000057_060 Hb_026048_090--Hb_000057_060 Hb_001433_170 Hb_001433_170 Hb_026048_090--Hb_001433_170 Hb_004126_010 Hb_004126_010 Hb_026048_090--Hb_004126_010 Hb_000085_340 Hb_000085_340 Hb_002067_160--Hb_000085_340 Hb_002067_160--Hb_005488_100 Hb_004738_090 Hb_004738_090 Hb_002067_160--Hb_004738_090 Hb_002067_160--Hb_026048_090 Hb_002067_160--Hb_002232_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
349.619 2.44025 17.1889 12.4469 408.641 415.884
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
188.182 236.63 198.409 45.8802 21.0004

CAGE analysis