Hb_007178_010

Information

Type -
Description -
Location Contig7178: 495-718
Sequence    

Annotation

kegg
ID rcu:RCOM_0484460
description Wound-induced protein WIN2 precursor, putative
nr
ID CAB62537.1
description pseudo-hevein [Hevea brasiliensis]
swissprot
ID P02877
description Pro-hevein OS=Hevea brasiliensis GN=HEV1 PE=1 SV=2
trembl
ID Q6KF83
description Pseudo-hevein (Fragment) OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0008061
description wound-induced protein win2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007178_010 0.0 - - pseudo-hevein [Hevea brasiliensis]
2 Hb_002232_180 0.0528210342 - - PREDICTED: DUF21 domain-containing protein At2g14520-like isoform X1 [Populus euphratica]
3 Hb_007810_040 0.0734496746 - - PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Jatropha curcas]
4 Hb_002067_160 0.0769771154 - - Protein MLO, putative [Ricinus communis]
5 Hb_005488_100 0.0801629734 - - hypothetical protein JCGZ_00295 [Jatropha curcas]
6 Hb_003906_110 0.0864528054 - - PREDICTED: molybdenum cofactor sulfurase [Jatropha curcas]
7 Hb_010931_100 0.0875607599 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
8 Hb_002989_080 0.090929011 - - hypothetical protein JCGZ_22462 [Jatropha curcas]
9 Hb_003656_030 0.0933807138 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
10 Hb_017134_040 0.0937976948 - - hypothetical protein AALP_AA3G042000 [Arabis alpina]
11 Hb_004126_010 0.0988870978 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
12 Hb_002609_260 0.1001508449 - - CCCH-type zinc finger protein [Hevea brasiliensis]
13 Hb_005730_020 0.1003823327 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.1-like [Jatropha curcas]
14 Hb_003627_020 0.1004003446 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
15 Hb_019654_070 0.1012075811 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
16 Hb_000563_540 0.1015701985 - - PREDICTED: Fanconi anemia group I protein [Jatropha curcas]
17 Hb_004884_060 0.1026046351 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
18 Hb_009510_030 0.1047113467 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
19 Hb_003786_110 0.1049043048 - - PREDICTED: uncharacterized protein LOC105639617 [Jatropha curcas]
20 Hb_004738_090 0.1051886409 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007178_010 Hb_007178_010 Hb_002232_180 Hb_002232_180 Hb_007178_010--Hb_002232_180 Hb_007810_040 Hb_007810_040 Hb_007178_010--Hb_007810_040 Hb_002067_160 Hb_002067_160 Hb_007178_010--Hb_002067_160 Hb_005488_100 Hb_005488_100 Hb_007178_010--Hb_005488_100 Hb_003906_110 Hb_003906_110 Hb_007178_010--Hb_003906_110 Hb_010931_100 Hb_010931_100 Hb_007178_010--Hb_010931_100 Hb_002232_180--Hb_007810_040 Hb_002232_180--Hb_002067_160 Hb_002609_260 Hb_002609_260 Hb_002232_180--Hb_002609_260 Hb_004738_090 Hb_004738_090 Hb_002232_180--Hb_004738_090 Hb_002232_180--Hb_005488_100 Hb_003304_080 Hb_003304_080 Hb_007810_040--Hb_003304_080 Hb_002078_040 Hb_002078_040 Hb_007810_040--Hb_002078_040 Hb_095397_010 Hb_095397_010 Hb_007810_040--Hb_095397_010 Hb_043637_010 Hb_043637_010 Hb_007810_040--Hb_043637_010 Hb_000085_340 Hb_000085_340 Hb_002067_160--Hb_000085_340 Hb_002067_160--Hb_005488_100 Hb_002067_160--Hb_004738_090 Hb_026048_090 Hb_026048_090 Hb_002067_160--Hb_026048_090 Hb_005488_100--Hb_010931_100 Hb_005488_100--Hb_002609_260 Hb_000264_190 Hb_000264_190 Hb_005488_100--Hb_000264_190 Hb_003906_120 Hb_003906_120 Hb_003906_110--Hb_003906_120 Hb_004884_060 Hb_004884_060 Hb_003906_110--Hb_004884_060 Hb_003906_110--Hb_010931_100 Hb_002989_080 Hb_002989_080 Hb_003906_110--Hb_002989_080 Hb_000249_110 Hb_000249_110 Hb_003906_110--Hb_000249_110 Hb_010931_100--Hb_000264_190 Hb_010931_100--Hb_002609_260 Hb_004545_150 Hb_004545_150 Hb_010931_100--Hb_004545_150 Hb_000563_540 Hb_000563_540 Hb_010931_100--Hb_000563_540 Hb_027751_020 Hb_027751_020 Hb_010931_100--Hb_027751_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6196.73 99.5997 39.754 425.152 5474.65 5517.99
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2940.4 2315.79 3293.56 509.884 102.386

CAGE analysis