Hb_003906_110

Information

Type -
Description -
Location Contig3906: 56561-58618
Sequence    

Annotation

kegg
ID rcu:RCOM_1497800
description molybdopterin cofactor sulfurase, putative
nr
ID XP_012090341.1
description PREDICTED: molybdenum cofactor sulfurase [Jatropha curcas]
swissprot
ID Q8LGM7
description Molybdenum cofactor sulfurase OS=Solanum lycopersicum GN=FLACCA PE=2 SV=1
trembl
ID A0A067JET9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26173 PE=3 SV=1
Gene Ontology
ID GO:0003824
description molybdenum cofactor sulfurase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 046_E10.ab1: 57735-58560

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003906_110 0.0 - - PREDICTED: molybdenum cofactor sulfurase [Jatropha curcas]
2 Hb_003906_120 0.0737890067 - - -
3 Hb_004884_060 0.0798889087 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
4 Hb_010931_100 0.0803957002 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
5 Hb_007178_010 0.0864528054 - - pseudo-hevein [Hevea brasiliensis]
6 Hb_002989_080 0.0864895219 - - hypothetical protein JCGZ_22462 [Jatropha curcas]
7 Hb_000249_110 0.0917232629 - - hypothetical protein JCGZ_22462 [Jatropha curcas]
8 Hb_002232_180 0.0950186087 - - PREDICTED: DUF21 domain-containing protein At2g14520-like isoform X1 [Populus euphratica]
9 Hb_002609_260 0.1022896417 - - CCCH-type zinc finger protein [Hevea brasiliensis]
10 Hb_004126_010 0.1023301111 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
11 Hb_004545_150 0.1035714612 - - PREDICTED: paramyosin [Jatropha curcas]
12 Hb_007810_040 0.1081314671 - - PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Jatropha curcas]
13 Hb_027751_020 0.1105031338 - - PREDICTED: uncharacterized protein LOC104886652 [Beta vulgaris subsp. vulgaris]
14 Hb_000264_190 0.111247921 - - sphingolipid delta 4 desaturase/C-4 hydroxylase protein des2, putative [Ricinus communis]
15 Hb_002843_160 0.1118591909 - - PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR1 [Jatropha curcas]
16 Hb_005488_100 0.1125319746 - - hypothetical protein JCGZ_00295 [Jatropha curcas]
17 Hb_004738_090 0.1140702595 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005730_020 0.1149774799 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.1-like [Jatropha curcas]
19 Hb_002067_160 0.1162658305 - - Protein MLO, putative [Ricinus communis]
20 Hb_000563_540 0.1188682173 - - PREDICTED: Fanconi anemia group I protein [Jatropha curcas]

Gene co-expression network

sample Hb_003906_110 Hb_003906_110 Hb_003906_120 Hb_003906_120 Hb_003906_110--Hb_003906_120 Hb_004884_060 Hb_004884_060 Hb_003906_110--Hb_004884_060 Hb_010931_100 Hb_010931_100 Hb_003906_110--Hb_010931_100 Hb_007178_010 Hb_007178_010 Hb_003906_110--Hb_007178_010 Hb_002989_080 Hb_002989_080 Hb_003906_110--Hb_002989_080 Hb_000249_110 Hb_000249_110 Hb_003906_110--Hb_000249_110 Hb_002232_180 Hb_002232_180 Hb_003906_120--Hb_002232_180 Hb_095397_010 Hb_095397_010 Hb_003906_120--Hb_095397_010 Hb_002609_260 Hb_002609_260 Hb_003906_120--Hb_002609_260 Hb_003906_120--Hb_010931_100 Hb_004545_150 Hb_004545_150 Hb_003906_120--Hb_004545_150 Hb_004884_060--Hb_000249_110 Hb_000907_100 Hb_000907_100 Hb_004884_060--Hb_000907_100 Hb_004884_060--Hb_002989_080 Hb_004884_060--Hb_007178_010 Hb_002843_160 Hb_002843_160 Hb_004884_060--Hb_002843_160 Hb_000264_190 Hb_000264_190 Hb_010931_100--Hb_000264_190 Hb_010931_100--Hb_002609_260 Hb_010931_100--Hb_004545_150 Hb_000563_540 Hb_000563_540 Hb_010931_100--Hb_000563_540 Hb_005488_100 Hb_005488_100 Hb_010931_100--Hb_005488_100 Hb_027751_020 Hb_027751_020 Hb_010931_100--Hb_027751_020 Hb_007178_010--Hb_002232_180 Hb_007810_040 Hb_007810_040 Hb_007178_010--Hb_007810_040 Hb_002067_160 Hb_002067_160 Hb_007178_010--Hb_002067_160 Hb_007178_010--Hb_005488_100 Hb_007178_010--Hb_010931_100 Hb_002989_080--Hb_002843_160 Hb_000603_200 Hb_000603_200 Hb_002989_080--Hb_000603_200 Hb_002989_080--Hb_007178_010 Hb_002989_080--Hb_004545_150 Hb_002989_080--Hb_002232_180 Hb_000249_110--Hb_027751_020 Hb_000249_110--Hb_002843_160 Hb_000249_110--Hb_002609_260 Hb_003001_030 Hb_003001_030 Hb_000249_110--Hb_003001_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
237.66 5.74053 4.56712 9.70371 207.582 198.947
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
110.221 58.649 168.633 8.08128 3.38416

CAGE analysis